RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 A0A1B0GX30 115 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 H0Y980 276 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 ZFP36P26651 326 aaKnown RBP11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 C2orf68Q2NKX9 166 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 SP6Q3SY56 376 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 SLC25A48Q6ZT89 311 aaKnown RBP11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 LRRC75A-AS1Q8N1F1 130 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 TP53RKQ96S44 253 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 GPHA2Q96T91 129 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 RANGRFQ9HD47 186 aaPredicted RBP11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 SDHAF2Q9NX18 166 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 ONECUT1Q9UBC0 465 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 GAB2Q9UQC2 676 aa11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 YLPM1P49750 1951 aaKnown RBP11.86□□□□□ -0.51
ARHGEF40-208ENST00000557498 DOCK11Q5JSL3 2073 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 hCG_1809904A0A1W2PP81 198 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 A0A1W2PPE2 198 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 A0A1W2PPE3 182 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 A0A1W2PR64 198 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 A0A1W2PRV1 198 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 RNF212BA8MTL3 300 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 M0R1W7 72 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 FOXH1O75593 365 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 B3GALNT1O75752 331 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 HLA-GP17693 338 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 F2RP25116 425 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 SRPXP78539 464 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 CLEC12BQ2HXU8 276 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 ZNF66Q6ZN08 573 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 LIAT1Q6ZQX7 453 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 C8orf31Q8N9H6 132 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 OR5M8Q8NGP6 311 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 OR51H1Q8NH63 302 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 ZNF596Q8TC21 504 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 DMRTB1Q96MA1 342 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 TMEM133Q9H2Q1 129 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 LIN7CQ9NUP9 197 aaKnown RBP11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 MYO18BQ8IUG5 2567 aa11.85□□□□□ -0.51
ARHGEF40-208ENST00000557498 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 SLC25A16P16260 332 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 UCP1P25874 307 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 LCN2P80188 198 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 CATR1Q13166 79 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 BTNL3Q6UXE8 466 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 ODF3L1Q8IXM7 274 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 TCTE3Q8IZS6 198 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 LGI3Q8N145 548 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 LYG1Q8N1E2 194 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 LINC00311Q8N616 119 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 KIR3DL3Q8N743 410 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 LRTM2Q8N967 370 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 OR9G1Q8NH87 305 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 GLYATL2Q8WU03 294 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 MBD6Q96DN6 1003 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 FYTTD1Q96QD9 318 aaKnown RBP11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 TMEM222Q9H0R3 208 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 RAB18Q9NP72 206 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 PIPOXQ9P0Z9 390 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 MALRD1Q5VYJ5 2156 aa11.84□□□□□ -0.51
ARHGEF40-208ENST00000557498 CHD6Q8TD26 2715 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 SAA2-SAA4A0A096LPE2 208 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 J3QR06 171 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 M0R1X1 148 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 CCSO14618 274 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 RAB29O14966 203 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 SIX6O95475 246 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 GIPP09681 153 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 SAA2P0DJI9 122 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 RPL30P62888 115 aaKnown RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 PAX2Q02962 417 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 RPL39P5Q59GN2 51 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 DCAF12L2Q5VW00 463 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 ABHD12Q8N2K0 398 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 Q8N7P7 452 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 LHFPL5Q8TAF8 219 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 C18orf12Q96KH6 178 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 TMEM56Q96MV1 263 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 HSD17B10Q99714 261 aaKnown RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 CHIAQ9BZP6 476 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 ZNRD1Q9P1U0 126 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 POLR3KQ9Y2Y1 108 aaPredicted RBP11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 TMEM56-RWDD3S4R434 201 aa11.83□□□□□ -0.52
ARHGEF40-208ENST00000557498 IGHV2-26A0A0B4J1V2 119 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 FAM157AC9JC47 383 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 BOLA2-SMG1P6H3BVE0 249 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 PROP1O75360 226 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 ADAP1O75689 374 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 OR2A4O95047 310 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 HNRNPCP07910 306 aaKnown RBP eCLIP11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 H2BFSP57053 126 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 ARF6P62330 175 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
ARHGEF40-208ENST00000557498 ASB13Q8WXK3 278 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms