RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 DEFB108AA8MXU0 73 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 C12orf77C9JDV5 145 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 CLDN1O95832 211 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 RFESDQ8TAC1 157 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 MRGPRDQ8TDS7 321 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 LSM10Q969L4 123 aaKnown RBP14.9□□□□□ -0.02
XRCC3-218ENST00000557439 TRIB1Q96RU8 372 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 SSX3Q99909 188 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 CLN8Q9UBY8 286 aa14.9□□□□□ -0.02
XRCC3-218ENST00000557439 SMG1Q96Q15 3661 aaKnown RBP14.9□□□□□ -0.02
XRCC3-218ENST00000557439 SH2D1BO14796 132 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 IGKV1D-33P01593 117 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 IGKV1-33P01594 117 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 S100A9P06702 114 aaKnown RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 MDKP21741 143 aaPredicted RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 SOX8P57073 446 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 B2MP61769 119 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 RBMXL1Q96E39 390 aaKnown RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 FER1L6-AS2Q96M78 137 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 DCTN5Q9BTE1 182 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 SMDT1Q9H4I9 107 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 SEBOXQ9HB31 216 aaPredicted RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 MSL2Q9HCI7 577 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 MBNL3Q9NUK0 354 aaKnown RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 CADP27708 2225 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 NPIPB11E5RHQ5 1161 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 RD3LP0DJH9 198 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 CD200P41217 278 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 NDUFA6P56556 154 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 LTC4SQ16873 150 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 KLF14Q8TD94 323 aaPredicted RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 MALSU1Q96EH3 234 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 TMPRSS5Q9H3S3 457 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 RBKSQ9H477 322 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 RYDENQ9NUL5 291 aaKnown RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 LIN7CQ9NUP9 197 aaKnown RBP14.89□□□□□ -0.03
XRCC3-218ENST00000557439 POLDIP2Q9Y2S7 368 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 ICE1Q9Y2F5 2266 aa14.89□□□□□ -0.03
XRCC3-218ENST00000557439 CYB5BO43169 146 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 RAB2AP61019 212 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 ZNF146Q15072 292 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 ALKBH2Q6NS38 261 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 ZDHHC16Q969W1 377 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 UNKLQ9H9P5 680 aaKnown RBP14.88□□□□□ -0.03
XRCC3-218ENST00000557439 IFITM10A6NMD0 228 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 C17orf98A8MV24 154 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 PPIHO43447 177 aaKnown RBP14.88□□□□□ -0.03
XRCC3-218ENST00000557439 S1PR2O95136 353 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 IFNA17P01571 189 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 HBE1P02100 147 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 SLC25A6P12236 298 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 SSTR5P35346 364 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 MDH2P40926 338 aaKnown RBP14.88□□□□□ -0.03
XRCC3-218ENST00000557439 BRWD1-AS2P59051 145 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 LRRC75BQ2VPJ9 315 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 KHDC3LQ587J8 217 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 PDZD11Q5EBL8 140 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 VWA1Q6PCB0 445 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 GSN-AS1Q9NRJ2 163 aa14.88□□□□□ -0.03
XRCC3-218ENST00000557439 INTS1Q8N201 2190 aaKnown RBP14.88□□□□□ -0.03
XRCC3-218ENST00000557439 CEBPZOSA8MTT3 80 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 NKX2-8O15522 239 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 SMIM6P0DI80 62 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 BCL2P10415 239 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 FABP6P51161 128 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 SLC38A11Q08AI6 406 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 C11orf53Q8IXP5 236 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 WDR61Q9GZS3 305 aaKnown RBP14.87□□□□□ -0.03
XRCC3-218ENST00000557439 IGHV3-13P01766 116 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 IGHV3-7P01780 117 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 HBZP02008 142 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 S100A8P05109 93 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 FABP1P07148 127 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 GABRA2P47869 451 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 CCL11P51671 97 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 SPNS3Q6ZMD2 512 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 MOB1BQ7L9L4 216 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 WIPI2Q9Y4P8 454 aa14.87□□□□□ -0.03
XRCC3-218ENST00000557439 TRGC2P03986 189 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 IL2RGP31785 369 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 MAS1LP35410 378 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 GLIPR1P48060 266 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 GABRA6Q16445 453 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 GFI1BQ5VTD9 330 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 CDPF1Q6NVV7 123 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 GATAD1Q8WUU5 269 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 COQ2Q96H96 371 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 ZDHHC11Q9H8X9 412 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 PTBP3O95758 552 aaKnown RBP14.86□□□□□ -0.03
XRCC3-218ENST00000557439 C4orf17Q53FE4 359 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 PLA2G2CQ5R387 149 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 RPP25LQ8N5L8 163 aaKnown RBP14.86□□□□□ -0.03
XRCC3-218ENST00000557439 CA5BP1Q8WTZ4 195 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 GMPPAQ96IJ6 420 aaPredicted RBP14.86□□□□□ -0.03
XRCC3-218ENST00000557439 SLC25A22Q9H936 323 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 TREM2Q9NZC2 230 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 DOK5Q9P104 306 aa14.86□□□□□ -0.03
XRCC3-218ENST00000557439 CNOT1A5YKK6 2376 aaKnown RBP14.86□□□□□ -0.03
XRCC3-218ENST00000557439 TRBV23-1A0A0A0MS06 115 aa14.85□□□□□ -0.03
XRCC3-218ENST00000557439 ODAMA1E959 279 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms