RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CLN5O75503 358 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 CLDN1O95832 211 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 HAND1O96004 215 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 IGKV1-39P01597 117 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 IGLV2-14P01704 120 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 IGKV1D-39P04432 117 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 HOXC12P31275 282 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 IL2RGP31785 369 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 IDH3GP51553 393 aaPredicted RBP5.91□□□□□ -1.46
TDP1-213ENST00000555880 ERVK11-1P61568 191 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 NKX6-1P78426 367 aaPredicted RBP5.91□□□□□ -1.46
TDP1-213ENST00000555880 ARG2P78540 354 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 SLC38A11Q08AI6 406 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 CATR1Q13166 79 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 ZNF146Q15072 292 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 MRGPRGQ86SM5 289 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 DRAM1Q8N682 238 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 ZNF645Q8N7E2 425 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 TMEM178AQ8NBL3 297 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 OR13D1Q8NGV5 346 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 Q8WTZ3 238 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 GALMQ96C23 342 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 WDYHV1Q96HA8 205 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 RCC1LQ96I51 464 aaKnown RBP5.91□□□□□ -1.46
TDP1-213ENST00000555880 GMPPAQ96IJ6 420 aaPredicted RBP5.91□□□□□ -1.46
TDP1-213ENST00000555880 TOLLIPQ9H0E2 274 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 OR51M1Q9H341 326 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 GSN-AS1Q9NRJ2 163 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 MBNL3Q9NUK0 354 aaKnown RBP5.91□□□□□ -1.46
TDP1-213ENST00000555880 VAX2Q9UIW0 290 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 WIPI2Q9Y4P8 454 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 KNTC1P50748 2209 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 NCOR1O75376 2440 aa5.91□□□□□ -1.46
TDP1-213ENST00000555880 UBE2L5PA0A1B0GUS4 154 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 MAP1LC3B2A6NCE7 125 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 CEBPZOSA8MTT3 80 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 CLDN34H7C241 214 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 GRPP07492 148 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
TDP1-213ENST00000555880 TNFRSF9Q07011 255 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 ATP6V1FQ16864 119 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 ZNF585BQ52M93 769 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 ZNF766Q5HY98 468 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 NCMAPQ5T1S8 102 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 OR8G2PQ6IF36 304 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 ZNF343Q6P1L6 599 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 WDR86Q86TI4 376 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 VASH2Q86V25 355 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 FGFRL1Q8N441 504 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 UBALD1Q8TB05 177 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 TAF15Q92804 592 aaKnown RBP eCLIP5.9□□□□□ -1.46
TDP1-213ENST00000555880 MAP1LC3BQ9GZQ8 125 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 WDR61Q9GZS3 305 aaKnown RBP5.9□□□□□ -1.46
TDP1-213ENST00000555880 ZNF665Q9H7R5 613 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 OBP2BQ9NPH6 170 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 SLC39A9Q9NUM3 307 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 TMEM242Q9NWH2 141 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 IL17BQ9UHF5 180 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 TIMM9Q9Y5J7 89 aa5.9□□□□□ -1.46
TDP1-213ENST00000555880 TGIF2-C20orf24A0A0A6YYL0 155 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 OOEPA6NGQ2 149 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 IQCF6A8MYZ5 107 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 PPIHO43447 177 aaKnown RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 URB1O60287 2271 aaKnown RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 TNFSF15O95150 251 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CYB5R3P00387 301 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 MBP02144 154 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CELA3BP08861 270 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 HOXA5P20719 270 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CDX1P47902 265 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 FGF8P55075 233 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 NDUFA6P56556 154 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 ERVFRD-1P60508 538 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 TNP2Q05952 138 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 ARL16Q0P5N6 197 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 KIAA2026Q5HYC2 2103 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 INO80CQ6PI98 192 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 TCTEX1D1Q8N7M0 179 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 SLC25A40Q8TBP6 338 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 LHX4Q969G2 390 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 FAM210BQ96KR6 192 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CIB3Q96Q77 187 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 OR4C12Q96R67 309 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CTDSP1Q9GZU7 261 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 OR2D2Q9H210 308 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 RBKSQ9H477 322 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 GAR1Q9NY12 217 aaKnown RBP5.9□□□□□ -1.47
TDP1-213ENST00000555880 SPRR3Q9UBC9 169 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 HSPB7Q9UBY9 170 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 MIOXQ9UGB7 285 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 WASF3Q9UPY6 502 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 LAMP3Q9UQV4 416 aa5.9□□□□□ -1.47
TDP1-213ENST00000555880 ELOA3CA0A087WX78 387 aaPredicted RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 A0A1W2PNU3 283 aaPredicted RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 SEC14L6B5MCN3 397 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 PPP1R2P9O14990 202 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 ZNF737O75373 536 aa5.89□□□□□ -1.47
TDP1-213ENST00000555880 RBMXL2O75526 392 aaKnown RBP5.89□□□□□ -1.47
TDP1-213ENST00000555880 YIF1AO95070 293 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms