RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-217ENST00000555116 HRASLSQ9HDD0 168 aa11.46□□□□□ -0.57
SHMT2-217ENST00000555116 KCNK7Q9Y2U2 307 aa11.46□□□□□ -0.57
SHMT2-217ENST00000555116 IGHV3-43A0A0B4J1X8 118 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 LEUTXA8MZ59 168 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 DHFRP00374 187 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 IGHV3-43DP0DP04 118 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 DYNLT3P51808 116 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RPL15P61313 204 aaKnown RBP11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-217ENST00000555116 HMGN3Q15651 99 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 TMEM30BQ3MIR4 351 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 OR10R2Q8NGX6 335 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RAB3CQ96E17 227 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RIMS4Q9H426 269 aaPredicted RBP11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RAB9BQ9NP90 201 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 KCNIP1Q9NZI2 227 aa11.46□□□□□ -0.58
SHMT2-217ENST00000555116 RGS13O14921 159 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 GNG10P50151 68 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 RAB13P51153 203 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 CD83Q01151 205 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 RELBQ01201 579 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 LY6EQ16553 131 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 ZFP69Q49AA0 526 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 TPTE2P1Q5T6R2 138 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 PHF21AQ96BD5 680 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 FYTTD1Q96QD9 318 aaKnown RBP11.45□□□□□ -0.58
SHMT2-217ENST00000555116 ATG5Q9H1Y0 275 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 C1RLQ9NZP8 487 aa11.45□□□□□ -0.58
SHMT2-217ENST00000555116 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 C7orf66A4D0T2 115 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 METTL21EPA6NDL7 271 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 NAP1L6A6NFF2 107 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 MFNGO00587 321 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 RAG2P55895 527 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 Q3ZCU0 254 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 MOB1BQ7L9L4 216 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 PRR18Q8N4B5 295 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 LINC00311Q8N616 119 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 ZNF439Q8NDP4 499 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 CAPSLQ8WWF8 208 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 GHITMQ9H3K2 345 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 CHMP1AQ9HD42 196 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-217ENST00000555116 TENM1Q9UKZ4 2725 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 AMMECR1Q9Y4X0 333 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-217ENST00000555116 NDUFA7O95182 113 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 CRYBA1P05813 215 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 H2AFB2P0C5Z0 115 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 HIST1H1DP16402 221 aaKnown RBP11.44□□□□□ -0.58
SHMT2-217ENST00000555116 CEACAM3P40198 252 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 AWAT1Q58HT5 328 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 TCTE3Q8IZS6 198 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 CMSS1Q9BQ75 279 aaKnown RBP11.44□□□□□ -0.58
SHMT2-217ENST00000555116 Q9N2K0 584 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 C12orf4Q9NQ89 552 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 MCUBQ9NWR8 336 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 GNG12Q9UBI6 72 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 MTFP1Q9UDX5 166 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
SHMT2-217ENST00000555116 A6NDX4 124 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 POM121CA8CG34 1229 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 OOSP1A8MZH6 123 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 SLC31A2O15432 143 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 RBBP9O75884 186 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 GNB3P16520 340 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 HTD2P86397 168 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 FOXL1Q12952 345 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 GNMTQ14749 295 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 OR52L2PQ8NGH6 319 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 OR10V1Q8NGI7 309 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 OR56B4Q8NH76 319 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 OR2S2Q9NQN1 319 aa11.43□□□□□ -0.58
SHMT2-217ENST00000555116 CHST1O43916 411 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 PRSS3P35030 304 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 ZNF134P52741 427 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 DIAPH2-AS1Q14236 149 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 MORN2Q502X0 79 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 CT45A1Q5HYN5 189 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 DHRS7BQ6IAN0 325 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-217ENST00000555116 C12orf54Q6X4T0 127 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 SLC25A48Q6ZT89 311 aaKnown RBP11.42□□□□□ -0.58
SHMT2-217ENST00000555116 OR10X1Q8NGY0 326 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 CT45A3Q8NHU0 189 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 GALMQ96C23 342 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHMT2-217ENST00000555116 JPT1Q9UK76 154 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 A0A0A6YYH2 397 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 A6NJ64 397 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 HLA-DRB3P79483 266 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 THOC7Q6I9Y2 204 aaKnown RBP11.42□□□□□ -0.58
SHMT2-217ENST00000555116 LIAT1Q6ZQX7 453 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 SLC7A5P1Q8MH63 180 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 DEDD2Q8WXF8 326 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 TOMM40LQ969M1 308 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 RPEQ96AT9 228 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 C20orf85Q9H1P6 137 aa11.42□□□□□ -0.58
SHMT2-217ENST00000555116 MED28Q9H204 178 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms