RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	GABRA2	P47869	451 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	GPM6A	P51674	278 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	DLX6	P56179	175 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	CAV3	P56539	151 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	ACTR3	P61158	418 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	BLCAP	P62952	87 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	GRB2	P62993	217 aa	Known RBP	3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	PJVK	Q0ZLH3	352 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	MICA	Q29983	383 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	NSUN5P1	Q3KNT7	163 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	HS3ST5	Q8IZT8	346 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	PGAM4	Q8N0Y7	254 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	ABHD12	Q8N2K0	398 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	CENPS	Q8N2Z9	138 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR4M1	Q8NGD0	313 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR52L1	Q8NGH7	329 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR10Z1	Q8NGY1	313 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	TRMT10A	Q8TBZ6	339 aa	Known RBP	3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	AQP3	Q92482	292 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	MCUR1	Q96AQ8	359 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	CMTM5	Q96DZ9	223 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	RNF170	Q96K19	258 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR5M11	Q96RB7	305 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	MICU1	Q9BPX6	476 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	FAM107B	Q9H098	131 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR51V1	Q9H2C8	321 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	GNB4	Q9HAV0	340 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	CMC2	Q9NRP2	79 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	FAM206A	Q9NX38	181 aa		3.92	□□□□□ -1.78
PSMC6-208	ENST00000554956	NBEAL2	Q6ZNJ1	2754 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956		A6NDX4	124 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	BTBD17	A6NE02	478 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956		A6NIN4	97 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	RFPL4A	A6NLU0	287 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	RFPL4AL1	F8VTS6	287 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	PIN1P1	O15428	100 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	MAGEB4	O15481	346 aa	Predicted RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	PAH	P00439	452 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	IGLV3-1	P01715	115 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	H2BFM	P0C1H6	154 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	ALOX5AP	P20292	161 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	HSD11B1	P28845	292 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	PPT1	P50897	306 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	IL5RA	Q01344	420 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	GINS1	Q14691	196 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	LRRC75B	Q2VPJ9	315 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	CEACAM21	Q3KPI0	293 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	LINC01620	Q4KN68	170 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	SAMD4B	Q5PRF9	694 aa	Known RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	TMEM236	Q5W0B7	351 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	DMKN	Q6E0U4	476 aa	Predicted RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	PYHIN1	Q6K0P9	492 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	HAGHL	Q6PII5	290 aa	Predicted RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	C10orf99	Q6UWK7	81 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	BAIAP2L2	Q6UXY1	529 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	ACP7	Q6ZNF0	438 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	TCF23	Q7RTU1	214 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	TRPM8	Q7Z2W7	1104 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	DEFB107A	Q8IZN7	70 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956		Q8N2B8	174 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	POM121L12	Q8N7R1	296 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR2T33	Q8NG76	320 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR52H1	Q8NGJ2	320 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR51G2	Q8NGK0	314 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	OTOS	Q8NHW6	89 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	MRAP	Q8TCY5	172 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	THEM6	Q8WUY1	208 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	SDSL	Q96GA7	329 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	OR8B4	Q96RC9	309 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	TEAD3	Q99594	435 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	RTL8A	Q9BWD3	113 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	CDCA4	Q9BXL8	241 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	TTTY10	Q9BZA0	68 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	DNTTIP1	Q9H147	329 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	THYN1	Q9P016	225 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	COPS3	Q9UNS2	423 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	CAB39	Q9Y376	341 aa	Predicted RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	SAMHD1	Q9Y3Z3	626 aa	Known RBP	3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956	MPC1	Q9Y5U8	109 aa		3.91	□□□□□ -1.78
PSMC6-208	ENST00000554956		A0A1B0GTI1	187 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	CCDC182	A6NF36	153 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	ACOD1	A6NK06	481 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	TMEM210	A6NLX4	147 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	RIIAD1	A6NNX1	92 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	VGLL3	A8MV65	326 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	ODF3B	A8MYP8	253 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956		K7EIL1	84 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956		M0R129	80 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	MMP23A	O75900	390 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	SERPINA3	P01011	423 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	PIP	P12273	146 aa	Predicted RBP	3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	IGLL1	P15814	213 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	ZNF3	P17036	446 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	SLC2A5	P22732	501 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	CFL1	P23528	166 aa	Known RBP	3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	CAPG	P40121	348 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	ID1	P41134	155 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	RPL31	P62899	125 aa	Known RBP	3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	GNG3	P63215	75 aa		3.9	□□□□□ -1.79
PSMC6-208	ENST00000554956	UTF1	Q5T230	341 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms