RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ST8SIA2Q92186 375 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 LEAP2Q969E1 77 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 MOB3AQ96BX8 217 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 BSCL2Q96G97 398 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 TP53RKQ96S44 253 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 GINS4Q9BRT9 223 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 OR51J1Q9H342 316 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 LINC00574Q9H8X3 128 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 C12orf4Q9NQ89 552 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 CCL28Q9NRJ3 127 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 TMEM106BQ9NUM4 274 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 ZNF701Q9NV72 531 aaPredicted RBP4.78□□□□□ -1.64
ATXN3-230ENST00000554673 EHFQ9NZC4 300 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 COQ3Q9NZJ6 369 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 FBXL17Q9UF56 701 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 SESN1Q9Y6P5 492 aa4.78□□□□□ -1.64
ATXN3-230ENST00000554673 ABCA12Q86UK0 2595 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 GCN1Q92616 2671 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 MEIKINA0A087WXM9 373 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 A0A1W2PPE3 182 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ODAMA1E959 279 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 C9orf170A2RU37 121 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 OOEPA6NGQ2 149 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 VWC2LB2RUY7 222 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 TRDCB7Z8K6 153 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 IFNL4K9M1U5 179 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF780AO75290 641 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ADAP1O75689 374 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 B3GALNT1O75752 331 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 PPYP01298 95 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 HBZP02008 142 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SNRNP70P08621 437 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 P0C879 139 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 OR5H8P0DN80 308 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZFP36P26651 326 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 FCGR2CP31995 323 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 PPP1CCP36873 323 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RAG2P55895 527 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ACTBP60709 375 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RPS23P62266 143 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ACTG1P63261 375 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SRSF4Q08170 494 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 TMEM187Q14656 261 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SRSF7Q16629 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 MRGPRG-AS1Q2M3A8 158 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SP6Q3SY56 376 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SCGB2B2Q4G0G5 96 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RNASE10Q5GAN6 216 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 PET117Q6UWS5 81 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF782Q6ZMW2 699 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF818PQ6ZRF7 136 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 Q6ZRM9 215 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RBPMS2Q6ZRY4 209 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 LINC00596Q86U02 117 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 Q8N7P7 452 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 SPERTQ8NA61 448 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 TMEM185AQ8NFB2 350 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 TERB2Q8NHR7 220 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ENKURQ8TC29 256 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 MSI2Q96DH6 328 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 MBD6Q96DN6 1003 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 OR10C1Q96KK4 312 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ATP6V0BQ99437 205 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZNF2Q9BSG1 426 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ALX4Q9H161 411 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 IFI27L2Q9H2X8 130 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 HEXA-AS1Q9H8Q6 139 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 TAF9BQ9HBM6 251 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 CBLN4Q9NTU7 201 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RABL2AQ9UBK7 228 aaPredicted RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 MGAT4CQ9UBM8 478 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 RABL2BQ9UNT1 228 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 PPP1R3CQ9UQK1 317 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 POLDIP2Q9Y2S7 368 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 NOP16Q9Y3C1 178 aaKnown RBP4.77□□□□□ -1.65
ATXN3-230ENST00000554673 ZFHX3Q15911 3703 aa4.77□□□□□ -1.65
ATXN3-230ENST00000554673 CSMD1Q96PZ7 3565 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 AKAP9Q99996 3911 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
ATXN3-230ENST00000554673 NAV3Q8IVL0 2385 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 IGHV1-69-2A0A0G2JMI3 117 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 A0A1W2PRX2 142 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 A4D1N5 150 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 NAP1L6A6NFF2 107 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 CRYM-AS1A6NIL9 109 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 LINC00473A8K010 186 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 CYSRT1A8MQ03 144 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 MCRIP1C9JLW8 97 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 DVL1O14640 695 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 KCNAB3O43448 404 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 OR2A4O95047 310 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 ECDO95905 644 aaPredicted RBP4.76□□□□□ -1.65
ATXN3-230ENST00000554673 GLAP06280 429 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 OR4E1P0C645 316 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 PAX6P26367 422 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 P2RX3P56373 397 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 DEFA1P59665 94 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 DEFA3P59666 94 aa4.76□□□□□ -1.65
ATXN3-230ENST00000554673 LMO4P61968 165 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms