RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 S1PR3Q99500 378 aa8.58□□□□□ -1.04
TMEM55B-205ENST00000554028 CLEC7AQ9BXN2 247 aa8.58□□□□□ -1.04
TMEM55B-205ENST00000554028 C5orf66Q9H5L9 145 aa8.58□□□□□ -1.04
TMEM55B-205ENST00000554028 SLC2A9Q9NRM0 540 aa8.58□□□□□ -1.04
TMEM55B-205ENST00000554028 AMMECR1Q9Y4X0 333 aaPredicted RBP8.58□□□□□ -1.04
TMEM55B-205ENST00000554028 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 TRAV20A0A0B4J274 112 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 IGKV1D-13A0A0B4J2D9 117 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 FAM157AC9JC47 383 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 J3QR06 171 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 MPPED1O15442 326 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ST8SIA5O15466 376 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 B3GALNT1O75752 331 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 IFNA2P01563 188 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 HLA-AP01891 365 aaKnown RBP8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 IGKV1-13P0DP09 117 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 CD34P28906 385 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 GZMKP49863 264 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 RND3P61587 244 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 CATR1Q13166 79 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 CT45A1Q5HYN5 189 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 DCAF12L2Q5VW00 463 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 NCR3LG1Q68D85 454 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF66Q6ZN08 573 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF818PQ6ZRF7 136 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 SLC25A48Q6ZT89 311 aaKnown RBP8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 KCTD9Q7L273 389 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 LYG2Q86SG7 212 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 LYG1Q8N1E2 194 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 C11orf42Q8N5U0 333 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 DRAM1Q8N682 238 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ADAD2Q8NCV1 583 aaKnown RBP8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 CT45A3Q8NHU0 189 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 COQ8AQ8NI60 647 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF431Q8TF32 576 aaPredicted RBP8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ABHD14BQ96IU4 210 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 PHB2Q99623 299 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 PARP12Q9H0J9 701 aaKnown RBP8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 OR51J1Q9H342 316 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 GAB2Q9UQC2 676 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 INSIG2Q9Y5U4 225 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
TMEM55B-205ENST00000554028 DCHS2Q6V1P9 2916 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 A0A0A6YYJ9 748 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 IGHV2-26A0A0B4J1V2 119 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 C3orf85A0A1B0GTC6 90 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 C9orf170A2RU37 121 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 CRYM-AS1A6NIL9 109 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 PGLYRP1O75594 196 aaPredicted RBP8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 SFT2D2O95562 160 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF16P17020 682 aaPredicted RBP8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 COX7A1P24310 79 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 LGALS4P56470 323 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 SRPXP78539 464 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 DHODHQ02127 395 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 DHRS2Q13268 280 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 PPP1R1AQ13522 171 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 FAM53AQ6NSI3 398 aaPredicted RBP8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 TBC1D26Q86UD7 250 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 PNKDQ8N490 385 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 TCTEX1D1Q8N7M0 179 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 UXS1Q8NBZ7 420 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF439Q8NDP4 499 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 CASTOR1Q8WTX7 329 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 CAPSLQ8WWF8 208 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 TMEM186Q96B77 213 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 C1orf159Q96HA4 380 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 ADTRPQ96IZ2 230 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 HSD17B10Q99714 261 aaKnown RBP8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 SEC22CQ9BRL7 303 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 AGMATQ9BSE5 352 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 PCGF1Q9BSM1 259 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 MED28Q9H204 178 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 NAA60Q9H7X0 242 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 UNKLQ9H9P5 680 aaKnown RBP8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 MMP26Q9NRE1 261 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 PRELID3BQ9Y3B1 194 aa8.56□□□□□ -1.04
TMEM55B-205ENST00000554028 A0A1W2PPE3 182 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 C7orf66A4D0T2 115 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 M0R1X1 148 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 TNFSF12O43508 249 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 DUS4LO95620 317 aaKnown RBP8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 SERPINE2P07093 398 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 VSIG10L2P0DP72 767 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 EPHA1P21709 976 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 CEACAM3P40198 252 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF134P52741 427 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 PAX2Q02962 417 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 SLC9A3R2Q15599 337 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 ZNF626Q68DY1 528 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 LIN54Q6MZP7 749 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 VMO1Q7Z5L0 202 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 C12orf45Q8N5I9 185 aaPredicted RBP8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 Q8N7P7 452 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 BEND2Q8NDZ0 799 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 CD300LFQ8TDQ1 290 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 TCTEX1D2Q8WW35 142 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
TMEM55B-205ENST00000554028 SIRT7Q9NRC8 400 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms