RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 EAF1Q96JC9 268 aaPredicted RBP18.55■□□□□ 0.56
NEK9-203ENST00000553945 C11orf54Q9H0W9 315 aaPredicted RBP18.55■□□□□ 0.56
NEK9-203ENST00000553945 ITGB1BP1O14713 200 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 AMY1AP04745 511 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 AMY2AP04746 511 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 DTYMKP23919 212 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 VDAC2P45880 294 aaPredicted RBP18.54■□□□□ 0.56
NEK9-203ENST00000553945 PITPNAQ00169 270 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 EBI3Q14213 229 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 C9orf152Q5JTZ5 239 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 ZNF833PQ6ZTB9 187 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 ABHD14BQ96IU4 210 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 ST6GALNAC5Q9BVH7 336 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 MRPL20Q9BYC9 149 aaKnown RBP18.54■□□□□ 0.56
NEK9-203ENST00000553945 DIABLOQ9NR28 239 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 PIPOXQ9P0Z9 390 aa18.54■□□□□ 0.56
NEK9-203ENST00000553945 A0A0A6YYH2 397 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 A6NJ64 397 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 RAB29O14966 203 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 PEX14O75381 377 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 GABARAPO95166 117 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 LSAMPQ13449 338 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 SRSF7Q16629 238 aaKnown RBP eCLIP18.53■□□□□ 0.56
NEK9-203ENST00000553945 PNLIPRP3Q17RR3 467 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 TMEM95Q3KNT9 176 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 OR10J5Q8NHC4 309 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 RBMXL1Q96E39 390 aaKnown RBP18.53■□□□□ 0.56
NEK9-203ENST00000553945 S1PR3Q99500 378 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 NABP2Q9BQ15 211 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 RDH8Q9NYR8 311 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 RNF150Q9ULK6 438 aa18.53■□□□□ 0.56
NEK9-203ENST00000553945 IGKV1D-8A0A087WSZ0 117 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 MOSP00540 346 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 CTF1Q16619 201 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 UBE2NLQ5JXB2 153 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 Q6ZS49 121 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 SAMD12Q8N8I0 201 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 CABLES2Q9BTV7 478 aa18.52■□□□□ 0.56
NEK9-203ENST00000553945 NCBP2LA6PVI3 153 aaKnown RBP18.51■□□□□ 0.55
NEK9-203ENST00000553945 SSX5O60225 188 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 RPL39P5Q59GN2 51 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 FAM71F2Q6NXP2 309 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 Q8N6K4 173 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 C5orf56Q8N8D9 126 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 KCTD12Q96CX2 325 aaKnown RBP18.51■□□□□ 0.55
NEK9-203ENST00000553945 S100A16Q96FQ6 103 aaKnown RBP18.51■□□□□ 0.55
NEK9-203ENST00000553945 GINS4Q9BRT9 223 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 ABCG5Q9H222 651 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 GHITMQ9H3K2 345 aa18.51■□□□□ 0.55
NEK9-203ENST00000553945 TRBV6-7A0A0A0MS04 114 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 FGF16O43320 207 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 C11orf44Q8N8P7 122 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 ZNF251Q9BRH9 671 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 AGMATQ9BSE5 352 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 DCSTAMPQ9H295 470 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 ZNF221Q9UK13 617 aa18.5■□□□□ 0.55
NEK9-203ENST00000553945 DIRAS3O95661 229 aa18.49■□□□□ 0.55
NEK9-203ENST00000553945 GPR12P47775 334 aa18.49■□□□□ 0.55
NEK9-203ENST00000553945 TOLLIPQ9H0E2 274 aa18.49■□□□□ 0.55
NEK9-203ENST00000553945 AUNIPQ9H7T9 357 aa18.49■□□□□ 0.55
NEK9-203ENST00000553945 COMMD3Q9UBI1 195 aa18.49■□□□□ 0.55
NEK9-203ENST00000553945 RORCP51449 518 aa18.48■□□□□ 0.55
NEK9-203ENST00000553945 WNT10AQ9GZT5 417 aa18.48■□□□□ 0.55
NEK9-203ENST00000553945 PKD1L1Q8TDX9 2849 aa18.48■□□□□ 0.55
NEK9-203ENST00000553945 XRCC3O43542 346 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 OR8U9P0C7N5 309 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 PTHLHP12272 177 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 HIST2H2BDQ6DRA6 164 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 FAM131AQ6UXB0 335 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 CLVS1Q8IUQ0 354 aaPredicted RBP18.47■□□□□ 0.55
NEK9-203ENST00000553945 OR8U1Q8NH10 309 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 ACOT12Q8WYK0 555 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 PLSCR3Q9NRY6 295 aa18.47■□□□□ 0.55
NEK9-203ENST00000553945 TRRAPQ9Y4A5 3859 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 CT45A6P0DMU7 189 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 CT45A5P0DMU8 189 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 CT45A7P0DMV0 189 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 F2RL1P55085 397 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 TMEM69Q5SWH9 247 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 GLDNQ6ZMI3 551 aaPredicted RBP18.46■□□□□ 0.55
NEK9-203ENST00000553945 CENPVQ7Z7K6 275 aaPredicted RBP18.46■□□□□ 0.55
NEK9-203ENST00000553945 Q8N9W7 124 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 OR8H1Q8NGG4 311 aa18.46■□□□□ 0.55
NEK9-203ENST00000553945 RBM7Q9Y580 266 aaKnown RBP18.46■□□□□ 0.55
NEK9-203ENST00000553945 FBN3Q75N90 2809 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 M0QZ24 198 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 FBXO24O75426 580 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 EIF4EP06730 217 aaKnown RBP18.45■□□□□ 0.54
NEK9-203ENST00000553945 CTXN2P0C2S0 81 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 PRR31Q5SQ13 230 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 CNIH2Q6PI25 160 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 H1FOOQ8IZA3 346 aaPredicted RBP18.45■□□□□ 0.54
NEK9-203ENST00000553945 GVQW1Q8N7I0 195 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 DRAXINQ8NBI3 349 aaPredicted RBP18.45■□□□□ 0.54
NEK9-203ENST00000553945 RASL11BQ9BPW5 248 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 OR2D2Q9H210 308 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 ANXA10Q9UJ72 324 aa18.45■□□□□ 0.54
NEK9-203ENST00000553945 M0R1X1 148 aa18.44■□□□□ 0.54
NEK9-203ENST00000553945 PROP1O75360 226 aa18.44■□□□□ 0.54
NEK9-203ENST00000553945 CD28P10747 220 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms