RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 TGFBR3Q03167 851 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF816Q0VGE8 651 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 SRSF6Q13247 344 aaKnown RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 KLF14Q8TD94 323 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 Q8WTZ3 238 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 GMPPAQ96IJ6 420 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 TRIB1Q96RU8 372 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 UFSP2Q9NUQ7 469 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 METTL1Q9UBP6 276 aaKnown RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 CLDN1O95832 211 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 CXCL1P09341 107 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 G6PCP35575 357 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 RPS16P62249 146 aaKnown RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 PLA2G2CQ5R387 149 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 OR52L2PQ8NGH6 319 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 TVP23CQ96ET8 276 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
ACTN1-211ENST00000553882 ZDHHC11Q9H8X9 412 aa12.26□□□□□ -0.45
ACTN1-211ENST00000553882 MGAQ8IWI9 3026 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 LOC102723971A0A1B0GUV8 181 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 SOX8P57073 446 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 LINC00205P59089 165 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 HBG1P69891 147 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 HBG2P69892 147 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 KHDC3LQ587J8 217 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 BTNL3Q6UXE8 466 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 OR4C12Q96R67 309 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 C12orf77C9JDV5 145 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 MLNRO43193 412 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 IFNA17P01571 189 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 S100A8P05109 93 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 CD55P08174 381 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 RAC2P15153 192 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 IL2RGP31785 369 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 RPL30P62888 115 aaKnown RBP12.25□□□□□ -0.45
ACTN1-211ENST00000553882 ELOBQ15370 118 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 DPPA3Q6W0C5 159 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 TMEM178AQ8NBL3 297 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 MALSU1Q96EH3 234 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 CADP27708 2225 aa12.25□□□□□ -0.45
ACTN1-211ENST00000553882 HEATR1Q9H583 2144 aaKnown RBP12.25□□□□□ -0.45
ACTN1-211ENST00000553882 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 PIGBOS1A0A0B4J2F0 54 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 M0R296 226 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 AP4M1O00189 453 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 HMGB3O15347 200 aaKnown RBP12.24□□□□□ -0.45
ACTN1-211ENST00000553882 CLN5O75503 358 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 SMIM6P0DI80 62 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 CD200P41217 278 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 GABRA2P47869 451 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 KIAA0141Q14154 515 aaPredicted RBP12.24□□□□□ -0.45
ACTN1-211ENST00000553882 PRAMEF6Q5VXH4 476 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 Q6ZR03 302 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 MRGPRDQ8TDS7 321 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 GALMQ96C23 342 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 C5orf30Q96GV9 206 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 MSL2Q9HCI7 577 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 KCNIP1Q9NZI2 227 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 WIPI2Q9Y4P8 454 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 INTS1Q8N201 2190 aaKnown RBP12.24□□□□□ -0.45
ACTN1-211ENST00000553882 IQCF6A8MYZ5 107 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 YIF1AO95070 293 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 BCL2P10415 239 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 TNFSF10P50591 281 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF674Q2M3X9 581 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 BEND4Q6ZU67 534 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 ICE1Q9Y2F5 2266 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 IGHV3-43A0A0B4J1X8 118 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 IGHV3-43DP0DP04 118 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 CCL11P51671 97 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 TNFRSF9Q07011 255 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 SLC38A11Q08AI6 406 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 GABRA6Q16445 453 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 LRRC75BQ2VPJ9 315 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 SPINK9Q5DT21 86 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 FAM90A2PQ658T7 463 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 VWA1Q6PCB0 445 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 RFESDQ8TAC1 157 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 WDR61Q9GZS3 305 aaKnown RBP12.24□□□□□ -0.45
ACTN1-211ENST00000553882 RBKSQ9H477 322 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 CLN8Q9UBY8 286 aa12.24□□□□□ -0.45
ACTN1-211ENST00000553882 TRAV1-1A0A0B4J248 108 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 TMEM238LA0A1B0GVL6 79 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 TMEM30CPA0ZSE6 113 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 NKX2-8O15522 239 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 HBZP02008 142 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 WNT2P09544 360 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 SSTR5P35346 364 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 FABP6P51161 128 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 FAM214BQ7L5A3 538 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 ZNF645Q8N7E2 425 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 DEFB108AA8MXU0 73 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 CYB5BO43169 146 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 S1PR2O95136 353 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 MAS1LP35410 378 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 SLC35E3Q7Z769 313 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 PLPPR2Q96GM1 343 aa12.23□□□□□ -0.45
ACTN1-211ENST00000553882 SEBOXQ9HB31 216 aaPredicted RBP12.23□□□□□ -0.45
ACTN1-211ENST00000553882 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms