RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 C11orf54Q9H0W9 315 aaPredicted RBP16.15■□□□□ 0.18
FOXA1-203ENST00000553751 PLSCR3Q9NRY6 295 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 RHBDL2Q9NX52 303 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 ZNF230Q9UIE0 474 aaPredicted RBP16.15■□□□□ 0.18
FOXA1-203ENST00000553751 MEGF8Q7Z7M0 2845 aa16.15■□□□□ 0.18
FOXA1-203ENST00000553751 NCBP2LA6PVI3 153 aaKnown RBP16.14■□□□□ 0.17
FOXA1-203ENST00000553751 RAB29O14966 203 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 CSF1P09603 554 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 KIR2DS1Q14954 304 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 CDNFQ49AH0 187 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 RPL39P5Q59GN2 51 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 IDNKQ5T6J7 187 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 Q8N9W7 124 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 OR5AU1Q8NGC0 362 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 OR5H6Q8NGV6 325 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 EDARADDQ8WWZ3 215 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 SLC25A38Q96DW6 304 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 PIPOXQ9P0Z9 390 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 ETV7Q9Y603 341 aa16.14■□□□□ 0.17
FOXA1-203ENST00000553751 SCGNO76038 276 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 GSTT2P0CG29 244 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 GSTT2BP0CG30 244 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 SMIM18P0DKX4 95 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 ARFRP1Q13795 201 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 IGSF11Q5DX21 431 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 FAM71E2Q8N5Q1 922 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 OR8H1Q8NGG4 311 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 ABHD14BQ96IU4 210 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 S1PR3Q99500 378 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 CITED2Q99967 270 aaPredicted RBP16.13■□□□□ 0.17
FOXA1-203ENST00000553751 TOLLIPQ9H0E2 274 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 LIN7CQ9NUP9 197 aaKnown RBP16.13■□□□□ 0.17
FOXA1-203ENST00000553751 RDH8Q9NYR8 311 aa16.13■□□□□ 0.17
FOXA1-203ENST00000553751 ADARB2-AS1A8MUL3 147 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 DIRAS3O95661 229 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 IGHG2P01859 326 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 SERPINB10P48595 397 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 F2RL1P55085 397 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 LSM3P62310 102 aaKnown RBP16.12■□□□□ 0.17
FOXA1-203ENST00000553751 SRSF7Q16629 238 aaKnown RBP eCLIP16.12■□□□□ 0.17
FOXA1-203ENST00000553751 TCTEX1D4Q5JR98 221 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 HACD4Q5VWC8 232 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 C10orf99Q6UWK7 81 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 Q6ZS49 121 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 CENPVQ7Z7K6 275 aaPredicted RBP16.12■□□□□ 0.17
FOXA1-203ENST00000553751 GHITMQ9H3K2 345 aa16.12■□□□□ 0.17
FOXA1-203ENST00000553751 IGKV1D-8A0A087WSZ0 117 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 TRBV6-7A0A0A0MS04 114 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 TMEM235A6NFC5 223 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 BET1O15155 118 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 TMEM127O75204 238 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 GSTP1P09211 210 aaKnown RBP16.11■□□□□ 0.17
FOXA1-203ENST00000553751 CT45A6P0DMU7 189 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 CT45A5P0DMU8 189 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 CT45A7P0DMV0 189 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 DTYMKP23919 212 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 TALDO1P37837 337 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 RPS19P39019 145 aaKnown RBP16.11■□□□□ 0.17
FOXA1-203ENST00000553751 CD83Q01151 205 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 ZNF260Q3ZCT1 412 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 NDUFA11Q86Y39 141 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 OR13F1Q8NGS4 319 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 FAM110DQ8TAY7 271 aaPredicted RBP16.11■□□□□ 0.17
FOXA1-203ENST00000553751 FUNDC2Q9BWH2 189 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 ABCG5Q9H222 651 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 NOTCH1P46531 2555 aa16.11■□□□□ 0.17
FOXA1-203ENST00000553751 GPR12P47775 334 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 NSUN5P1Q3KNT7 163 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 SLC35E3Q7Z769 313 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 NUDCD2Q8WVJ2 157 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 RITA1Q96K30 269 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 NOL4LQ96MY1 436 aaPredicted RBP16.1■□□□□ 0.17
FOXA1-203ENST00000553751 RNF150Q9ULK6 438 aa16.1■□□□□ 0.17
FOXA1-203ENST00000553751 LINC01548A6NM66 108 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 PROP1O75360 226 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 ACTBP60709 375 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 MMDQ15546 238 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 FAM131AQ6UXB0 335 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 GLDNQ6ZMI3 551 aaPredicted RBP16.09■□□□□ 0.17
FOXA1-203ENST00000553751 CROCCP3Q8IVE0 287 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 OR10J5Q8NHC4 309 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 RASL11BQ9BPW5 248 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 SPATA2Q9UM82 520 aa16.09■□□□□ 0.17
FOXA1-203ENST00000553751 PSMB11A5LHX3 300 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 OR5H14A6NHG9 310 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 H0YJW9 148 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 SSX5O60225 188 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 CNTFRP26992 372 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 NCS1P62166 190 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 PITPNAQ00169 270 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 PNLIPRP3Q17RR3 467 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 OR4X2Q8NGF9 303 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 OR5AN1Q8NGI8 311 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 CHPT1Q8WUD6 406 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 HSPB9Q9BQS6 159 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 DCSTAMPQ9H295 470 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 LINC00527Q9UJ94 153 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 ZNF221Q9UK13 617 aa16.08■□□□□ 0.16
FOXA1-203ENST00000553751 A0A0A6YYH2 397 aa16.07■□□□□ 0.16
FOXA1-203ENST00000553751 A6NJ64 397 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms