RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 LPCAT3Q6P1A2 487 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 HOGA1Q86XE5 327 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 ZBTB34Q8NCN2 500 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 OR52L2PQ8NGH6 319 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 OR10V1Q8NGI7 309 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 CT45A3Q8NHU0 189 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 ST6GALNAC6Q969X2 333 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 ISOC1Q96CN7 298 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 RDH8Q9NYR8 311 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 TAS2R8Q9NYW2 309 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 KIAA1456Q9P272 454 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 RSL24D1Q9UHA3 163 aaKnown RBP8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF107Q9UII5 783 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 MOB4Q9Y3A3 225 aa8.27□□□□□ -1.09
TRAFD1-208ENST00000552890 IGHV3-43A0A0B4J1X8 118 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 FAM172BPA6NC97 362 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 TIMM23O14925 209 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 KCNAB3O43448 404 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 SCTP09683 121 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 IGHV3-43DP0DP04 118 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 TMEM11P17152 192 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 LUMP51884 338 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 DLX1P56177 255 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 PRB3Q04118 309 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF833PQ6ZTB9 187 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 TMEM17Q86X19 198 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 OR5AP2Q8NGF4 316 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 OR5H6Q8NGV6 325 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 LEAP2Q969E1 77 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 DGCR14Q96DF8 476 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 DUX5Q96PT3 197 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 SLC25A33Q9BSK2 321 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 C11orf54Q9H0W9 315 aaPredicted RBP8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 MMP27Q9H306 513 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 TNFRSF19Q9NS68 423 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 PRELID3BQ9Y3B1 194 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 OR2W1Q9Y3N9 320 aa8.26□□□□□ -1.09
TRAFD1-208ENST00000552890 A0A1W2PPI3 338 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 H3BMQ9 156 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 CREBL2O60519 120 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 GSTT2P0CG29 244 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 GSTT2BP0CG30 244 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 RCVRNP35243 200 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 LGALS7P47929 136 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 TAS2R20P59543 309 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 LY6EQ16553 131 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 AWAT1Q58HT5 328 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 Q8N2B8 174 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 DRAM1Q8N682 238 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 OR56B4Q8NH76 319 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 PIFOQ8TCI5 191 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 DYNC2LI1Q8TCX1 351 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 NUDCD2Q8WVJ2 157 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 C17orf50Q8WW18 174 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 FCAMRQ8WWV6 532 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 TSNAXQ99598 290 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 RASL11BQ9BPW5 248 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF251Q9BRH9 671 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 AGMATQ9BSE5 352 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 HDHD3Q9BSH5 251 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF747Q9BV97 191 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 MRPS7Q9Y2R9 242 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
TRAFD1-208ENST00000552890 SAA2-SAA4A0A096LPE2 208 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 IGHV3-7P01780 117 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 IFNA6P05013 189 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 SNRNP70P08621 437 aaKnown RBP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 SAA2P0DJI9 122 aaPredicted RBP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 OR5H8P0DN80 308 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 PTBP1P26599 531 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 THBS3P49746 956 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 ZNF134P52741 427 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 PLA2G7Q13093 441 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 LSAMPQ13449 338 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 CDK10Q15131 360 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 PYHIN1Q6K0P9 492 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 PDPNQ86YL7 162 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 FOXRED2Q8IWF2 684 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 CMTM1Q8IZ96 169 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 H1FOOQ8IZA3 346 aaPredicted RBP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 COMMD1Q8N668 190 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 OR5H2Q8NGV7 314 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 SGMS2Q8NHU3 365 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 MCFD2Q8NI22 146 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 CD300LFQ8TDQ1 290 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 GIMAP1Q8WWP7 306 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 DEDD2Q8WXF8 326 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 DIRAS2Q96HU8 199 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 HSD17B10Q99714 261 aaKnown RBP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 LIN7CQ9NUP9 197 aaKnown RBP8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 WASHC3Q9Y3C0 194 aa8.24□□□□□ -1.09
TRAFD1-208ENST00000552890 PIGBOS1A0A0B4J2F0 54 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 A0A1W2PPE3 182 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 NCBP2LA6PVI3 153 aaKnown RBP8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 H7C2Y5 167 aa8.23□□□□□ -1.09
TRAFD1-208ENST00000552890 HPGDSO60760 199 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms