RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 OR5H14A6NHG9 310 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 H0Y980 276 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 TFAP2AP05549 437 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 GLAP06280 429 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 MGMTP16455 207 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 FUT3P21217 361 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 ALDH3A2P51648 485 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 AWAT2Q6E213 333 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 SIGIRRQ6IA17 410 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 GLDNQ6ZMI3 551 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-209ENST00000552162 GTSCR1Q86UQ5 136 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 JAGN1Q8N5M9 183 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 SMIM19Q96E16 107 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 RDH12Q96NR8 316 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 CLCC1Q96S66 551 aa12.46□□□□□ -0.41
RAB5C-209ENST00000552162 RANGRFQ9HD47 186 aaPredicted RBP12.46□□□□□ -0.41
RAB5C-209ENST00000552162 ST8SIA5O15466 376 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 GSTP1P09211 210 aaKnown RBP12.45□□□□□ -0.42
RAB5C-209ENST00000552162 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 OR2G6Q5TZ20 316 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 DMKNQ6E0U4 476 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-209ENST00000552162 OR9G4Q8NGQ1 327 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 RHOXF1Q8NHV9 184 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 Q96M66 194 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 THAP7Q9BT49 309 aaPredicted RBP12.45□□□□□ -0.42
RAB5C-209ENST00000552162 MRPS18AQ9NVS2 196 aaKnown RBP12.45□□□□□ -0.42
RAB5C-209ENST00000552162 PIPOXQ9P0Z9 390 aa12.45□□□□□ -0.42
RAB5C-209ENST00000552162 RPL36Q9Y3U8 105 aaKnown RBP12.45□□□□□ -0.42
RAB5C-209ENST00000552162 TRBV5-5A0A0J9YX44 114 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 C13orf42A0A1B0GVH6 325 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 H0YJW9 148 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 H7C2Y5 167 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 RAB29O14966 203 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 PDCD6O75340 191 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 GPX5O75715 221 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 CRTAPO75718 401 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-209ENST00000552162 RBBP9O75884 186 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 CA2P00918 260 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 FSTP19883 344 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 KLF5Q13887 457 aaPredicted RBP12.44□□□□□ -0.42
RAB5C-209ENST00000552162 ZNF562Q6V9R5 426 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 IL34Q6ZMJ4 242 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 PYDC1Q8WXC3 89 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 FAM110AQ9BQ89 295 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 ZNF355PQ9NSJ1 428 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 METTL1Q9UBP6 276 aaKnown RBP12.44□□□□□ -0.42
RAB5C-209ENST00000552162 STEAP1Q9UHE8 339 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 WASHC3Q9Y3C0 194 aa12.44□□□□□ -0.42
RAB5C-209ENST00000552162 ANKRD34BA5PLL1 514 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 BAG2O95816 211 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
RAB5C-209ENST00000552162 MC5RP33032 325 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 ETV1P50549 477 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 SYNJ2BPP57105 145 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 HMGN3Q15651 99 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 Q499Y3 187 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 C6orf141Q5SZD1 244 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 LCN12Q6JVE5 192 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 TMPRSS11AQ6ZMR5 421 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 CBR4Q8N4T8 237 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 POC5Q8NA72 575 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 APH1BQ8WW43 257 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 IL1F10Q8WWZ1 152 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 GHSRQ92847 366 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 HIPK2Q9H2X6 1198 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 ABRACLQ9P1F3 81 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 LRRC42Q9Y546 428 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 CEPT1Q9Y6K0 416 aa12.43□□□□□ -0.42
RAB5C-209ENST00000552162 SLC22A1O15245 554 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 OGG1O15527 345 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 LALBAP00709 142 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 PSG5Q15238 335 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 MOGAT2Q3SYC2 334 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 Q8N402 240 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 GRPEL2Q8TAA5 225 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 FAM46BQ96A09 425 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 OR14A2Q96R54 314 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 RNF5Q99942 180 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 FGF20Q9NP95 211 aaPredicted RBP12.42□□□□□ -0.42
RAB5C-209ENST00000552162 SLC23A1Q9UHI7 598 aa12.42□□□□□ -0.42
RAB5C-209ENST00000552162 A0A0G2JLM5 398 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 A0A1W2PPK0 400 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 SHISA3A0PJX4 238 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 H3BUA1 57 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 RASSF2P50749 326 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 RPS11P62280 158 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB5C-209ENST00000552162 YIF1BQ5BJH7 314 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 OR5AN1Q8NGI8 311 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 ABHD14BQ96IU4 210 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 SULT4A1Q9BR01 284 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 PARP12Q9H0J9 701 aaKnown RBP12.41□□□□□ -0.42
RAB5C-209ENST00000552162 PLEKHA3Q9HB20 300 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
RAB5C-209ENST00000552162 FRAS1Q86XX4 4008 aa12.4□□□□□ -0.42
RAB5C-209ENST00000552162 IZUMO1RA6ND01 250 aa12.4□□□□□ -0.42
RAB5C-209ENST00000552162 CIB2O75838 187 aa12.4□□□□□ -0.42
RAB5C-209ENST00000552162 SPDEFO95238 335 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms