RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 DIMT1Q9UNQ2 313 aaKnown RBP8.86□□□□□ -0.99
SMARCD1-208ENST00000550280 H0YJW9 148 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 LDLRAD4O15165 306 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 PDCD6O75340 191 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 CIB2O75838 187 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 GLAP06280 429 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 OR8U9P0C7N5 309 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 DCKP27707 260 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 VEGFCP49767 419 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 GPR176Q14439 515 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 ZNF554Q86TJ5 538 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 FAM46BQ96A09 425 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 MS4A10Q96PG2 267 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 DERL3Q96Q80 235 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 AGMATQ9BSE5 352 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 CST11Q9H112 138 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 KCNK15Q9H427 330 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 PALMDQ9NP74 551 aa8.85□□□□□ -0.99
SMARCD1-208ENST00000550280 PNMA8CA0A1B0GUJ8 204 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 ARPC1BO15143 372 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 HSPA12AO43301 675 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 CRTAPO75718 401 aaPredicted RBP8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 ATP5HO75947 161 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 HSPB1P04792 205 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 PITPNAQ00169 270 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 INSL4Q14641 139 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 YIF1BQ5BJH7 314 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 OR10K2Q6IF99 312 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 ZNF880Q6PDB4 577 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 TMPRSS11AQ6ZMR5 421 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 SVOPQ8N4V2 548 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 LFNGQ8NES3 379 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 ABHD14BQ96IU4 210 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 CLCC1Q96S66 551 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 RAB9BQ9NP90 201 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 CNOT2Q9NZN8 540 aaKnown RBP8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 ADAM30Q9UKF2 790 aa8.84□□□□□ -0.99
SMARCD1-208ENST00000550280 A0A0A6YYD4 124 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 NAPSAO96009 420 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 DEFA5Q01523 94 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 PSG5Q15238 335 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 HAGHQ16775 308 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 AKIRIN2Q53H80 203 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 ACTBL2Q562R1 376 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 LAIR2Q6ISS4 152 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 FAM71F2Q6NXP2 309 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 UNQ5815/PRO19632Q6UWF5 114 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 C6orf201Q7Z4U5 140 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 PPP1R27Q86WC6 154 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 CDH26Q8IXH8 852 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 TCTEX1D1Q8N7M0 179 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 OR2AK2Q8NG84 335 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 OR5AN1Q8NGI8 311 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 GALMQ96C23 342 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 ISOC1Q96CN7 298 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 OR4C12Q96R67 309 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 NICN1Q9BSH3 213 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 FAAP24Q9BTP7 215 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 C9orf16Q9BUW7 83 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 GHITMQ9H3K2 345 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 KCNIP1Q9NZI2 227 aa8.83□□□□□ -1
SMARCD1-208ENST00000550280 RBMXL2O75526 392 aaKnown RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 CA2P00918 260 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 IGKV1-16P04430 117 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 HTR2CP28335 458 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 CAPGP40121 348 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 TPPP2P59282 170 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 UNC119Q13432 240 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 KLF5Q13887 457 aaPredicted RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 ZNF562Q6V9R5 426 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 DRAXINQ8NBI3 349 aaPredicted RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 IL1F10Q8WWZ1 152 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 GGHQ92820 318 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 FLYWCH2Q96CP2 140 aaKnown RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 HDHD3Q9BSH5 251 aaPredicted RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 RETNQ9HD89 108 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 OR1A1Q9P1Q5 309 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 METTL1Q9UBP6 276 aaKnown RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 CKLFQ9UBR5 152 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 SLC23A1Q9UHI7 598 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 STUB1Q9UNE7 303 aa8.82□□□□□ -1
SMARCD1-208ENST00000550280 EXOSC1Q9Y3B2 195 aaKnown RBP8.82□□□□□ -1
SMARCD1-208ENST00000550280 IZUMO1RA6ND01 250 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 OR5H14A6NHG9 310 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 RAB29O14966 203 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 RGS11O94810 467 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 TRBV12-3P01733 135 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 RPS27AP62979 156 aaKnown RBP8.81□□□□□ -1
SMARCD1-208ENST00000550280 QRFPP83859 136 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 MRGPRG-AS1Q2M3A8 158 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 PYHIN1Q6K0P9 492 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 LRRTM1Q86UE6 522 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 PQLC1Q8N2U9 271 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 ZNF383Q8NA42 475 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 ABHD5Q8WTS1 349 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 UQCC2Q9BRT2 126 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 RSRP1Q9BUV0 290 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 S100A14Q9HCY8 104 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 CHCHD3Q9NX63 227 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms