RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ZNF443Q9Y2A4 671 aaPredicted RBP2.19□□□□□ -2.06
SNRPF-202ENST00000549580 WASHC3Q9Y3C0 194 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 FIS1Q9Y3D6 152 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 ALG5Q9Y673 324 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 R4GN34 69 aa2.19□□□□□ -2.06
SNRPF-202ENST00000549580 TRBV24-1A0A075B6N3 115 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.18□□□□□ -2.06
SNRPF-202ENST00000549580 IGKV1-12A0A0C4DH73 117 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 C4orf51C9J302 202 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 SH2D1AO60880 128 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 DEDDO75618 318 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 IGKV1D-12P01611 117 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 CTLA4P16410 223 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 PPP1CCP36873 323 aaKnown RBP2.18□□□□□ -2.06
SNRPF-202ENST00000549580 RAP1GDS1P52306 607 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 AKR1C2P52895 323 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 TCL1AP56279 114 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 FABP5Q01469 135 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 DEFA6Q01524 100 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 TSPAN31Q12999 210 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 ACSBG2Q5FVE4 666 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 C1orf195Q5TG92 126 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 ZNF660Q6AZW8 331 aaPredicted RBP2.18□□□□□ -2.06
SNRPF-202ENST00000549580 HS3ST5Q8IZT8 346 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 TMEM161BQ8NDZ6 487 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 C16orf78Q8WTQ4 265 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 Q8WTZ3 238 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 EEF1AKMT1Q8WVE0 214 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 HIST1H2BAQ96A08 127 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 OPTNQ96CV9 577 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 TMA16Q96EY4 203 aaKnown RBP2.18□□□□□ -2.06
SNRPF-202ENST00000549580 CCDC42Q96M95 316 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 GNB1LQ9BYB4 327 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 LRRC19Q9H756 370 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 TAS2R9Q9NYW1 312 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 OR5V1Q9UGF6 321 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 LINC00588Q9Y4M8 146 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 U3KQK5 164 aa2.18□□□□□ -2.06
SNRPF-202ENST00000549580 EVC2Q86UK5 1308 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 IGKV1D-37A0A075B6S9 117 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 TMEM210A6NLX4 147 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 KCNK1O00180 336 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 MRASO14807 208 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 RPP14O95059 124 aaKnown RBP2.17□□□□□ -2.06
SNRPF-202ENST00000549580 RNASE2P10153 161 aaKnown RBP2.17□□□□□ -2.06
SNRPF-202ENST00000549580 CDK2P24941 298 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 SLCO1A2P46721 670 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 RPS24P62847 133 aaKnown RBP2.17□□□□□ -2.06
SNRPF-202ENST00000549580 HERVK_113P63121 156 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 HLA-DRB3P79483 266 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 BSPH1Q075Z2 132 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 DHRS2Q13268 280 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 APOFQ13790 326 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 GNA13Q14344 377 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 IHHQ14623 411 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 PDGFRLQ15198 375 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 SLC9A3R2Q15599 337 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 C10orf91Q5T1B1 145 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 LRP11Q86VZ4 500 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 GID4Q8IVV7 300 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 OR2V1Q8NHB1 315 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 JOSD2Q8TAC2 188 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 ZNF721Q8TF20 911 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 CHMP6Q96FZ7 201 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 OR51V1Q9H2C8 321 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 SLC23A2Q9UGH3 650 aa2.17□□□□□ -2.06
SNRPF-202ENST00000549580 LSM5Q9Y4Y9 91 aaKnown RBP2.17□□□□□ -2.06
SNRPF-202ENST00000549580 SHANK1Q9Y566 2161 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 NID2Q14112 1375 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 LINC00862A6NCI5 91 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 D6RAR5 112 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 LECT2O14960 151 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 ATP5HO75947 161 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 IGLV3-27P01718 113 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 TNNC2P02585 160 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 HIST1H1EP10412 219 aaKnown RBP2.16□□□□□ -2.06
SNRPF-202ENST00000549580 HRES1P13985 223 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 CD36P16671 472 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 CRABP1P29762 137 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 CCR7P32248 378 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 CA7P43166 264 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 LINC00313P59037 77 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 SNAP25P60880 206 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 CTAG1AP78358 180 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 STX5Q13190 355 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 JOSD1Q15040 202 aaPredicted RBP2.16□□□□□ -2.06
SNRPF-202ENST00000549580 RSU1Q15404 277 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 BATFQ16520 125 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 KRTAP25-1Q3LHN0 102 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 TMEM176BQ3YBM2 270 aaPredicted RBP2.16□□□□□ -2.06
SNRPF-202ENST00000549580 OR10K2Q6IF99 312 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 WDR59Q6PJI9 974 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 GPR32P1Q8NGA4 272 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 SLC35G5Q96KT7 338 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 ABCG5Q9H222 651 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 OR51I2Q9H344 312 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
SNRPF-202ENST00000549580 MRPS16Q9Y3D3 137 aaKnown RBP2.16□□□□□ -2.06
SNRPF-202ENST00000549580 PCYT1BQ9Y5K3 369 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms