RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 FBXO7Q9Y3I1 522 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 LRRC42Q9Y546 428 aa13.53□□□□□ -0.24
CHMP1A-205ENST00000548650 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 UCHL1P09936 223 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 OR8U8P0C7N1 319 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 GNB1P62873 340 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 SPHARQ15513 63 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 HSD17B12Q53GQ0 312 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 RPL39P5Q59GN2 51 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 MINDY2Q8NBR6 621 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 OR6M1Q8NGM8 313 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 STEAP1Q9UHE8 339 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 VSIG4Q9Y279 399 aa13.52□□□□□ -0.25
CHMP1A-205ENST00000548650 SORL1Q92673 2214 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 RYR3Q15413 4870 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 BPNT1O95861 308 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 SRMP19623 302 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 ECI1P42126 302 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 ZNF616Q08AN1 781 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 IRF3Q14653 427 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 ZNF260Q3ZCT1 412 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 LIN54Q6MZP7 749 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 CEACAM19Q7Z692 300 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 GFI1Q99684 422 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 HDHD3Q9BSH5 251 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 LPAR5Q9H1C0 372 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 VCXQ9H320 206 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 CHMP1AQ9HD42 196 aaPredicted RBP13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 PIPOXQ9P0Z9 390 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 KIAA1456Q9P272 454 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 SLC23A1Q9UHI7 598 aa13.51□□□□□ -0.25
CHMP1A-205ENST00000548650 TRBV6-6A0A0A6YYG2 114 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 OR5H14A6NHG9 310 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 PTGES3LE9PB15 166 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 RAB29O14966 203 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 SOX15O60248 233 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 CT45A6P0DMU7 189 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 CT45A5P0DMU8 189 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 CT45A7P0DMV0 189 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 CRIP2P52943 208 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 MED22Q15528 200 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 GLDNQ6ZMI3 551 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 OR1N2Q8NGR9 330 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 OR5B12Q96R08 314 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 FBXL15Q9H469 300 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 AK3Q9UIJ7 227 aa13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 ZNF256Q9Y2P7 627 aaPredicted RBP13.5□□□□□ -0.25
CHMP1A-205ENST00000548650 FOXI3A8MTJ6 420 aaPredicted RBP13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 H0YJW9 148 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 ITGB1BP1O14713 200 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 RRHO14718 337 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 RAB9AP51151 201 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 HLA-DRB3P79483 266 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 LIPKQ5VXJ0 399 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 UFD1Q92890 307 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 PLEKHJ1Q9NW61 149 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 OR1A1Q9P1Q5 309 aa13.49□□□□□ -0.25
CHMP1A-205ENST00000548650 SLC17A2O00624 439 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 SOCS1O15524 211 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 NHLRC4P0CG21 123 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 P2RY14Q15391 338 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 TMEM91Q6ZNR0 172 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 OR5AN1Q8NGI8 311 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 TMEM203Q969S6 136 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 ABHD14BQ96IU4 210 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 ALX4Q9H161 411 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 RIMS4Q9H426 269 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 ISYNA1Q9NPH2 558 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 FOXA2Q9Y261 457 aaPredicted RBP13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 U3KQK5 164 aa13.48□□□□□ -0.25
CHMP1A-205ENST00000548650 A0A1W2PN81 502 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 EGR2P11161 476 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 CHRNA7P36544 502 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 INSL3P51460 131 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 RPS25P62851 125 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 CX3CL1P78423 397 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 ZNF660Q6AZW8 331 aaPredicted RBP13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 FAM89BQ8N5H3 189 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 CASTOR1Q8WTX7 329 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 NRG4Q8WWG1 115 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 DCUN1D4Q92564 292 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 URM1Q9BTM9 101 aaKnown RBP13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 C12orf4Q9NQ89 552 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 SCN3BQ9NY72 215 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 HSF4Q9ULV5 492 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 GAB2Q9UQC2 676 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 WASHC3Q9Y3C0 194 aa13.47□□□□□ -0.25
CHMP1A-205ENST00000548650 FCN1O00602 326 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 RBBP9O75884 186 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 LGALS1P09382 135 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 SNRPBP14678 240 aaKnown RBP13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 ARSBP15848 533 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 MC5RP33032 325 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 AQP4P55087 323 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 TPBGQ13641 420 aa13.46□□□□□ -0.25
CHMP1A-205ENST00000548650 TCTEX1D1Q8N7M0 179 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms