RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SETD6Q8TBK2 473 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 VCXQ9H320 206 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 DUSP21Q9H596 190 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 CHMP1AQ9HD42 196 aaPredicted RBP10.39□□□□□ -0.75
CPSF6-204ENST00000547486 PLEKHJ1Q9NW61 149 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 ABRACLQ9P1F3 81 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 AK3Q9UIJ7 227 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 AK6Q9Y3D8 172 aaKnown RBP10.39□□□□□ -0.75
CPSF6-204ENST00000547486 FBXO7Q9Y3I1 522 aa10.39□□□□□ -0.75
CPSF6-204ENST00000547486 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
CPSF6-204ENST00000547486 TRBV6-6A0A0A6YYG2 114 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 FOXI3A8MTJ6 420 aaPredicted RBP10.38□□□□□ -0.75
CPSF6-204ENST00000547486 I3L521 148 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 FCN1O00602 326 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 PROP1O75360 226 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 NDUFA3O95167 84 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 BPNT1O95861 308 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 OR5H8P0DN80 308 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 CD69Q07108 199 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 FAM131AQ6UXB0 335 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 GLDNQ6ZMI3 551 aaPredicted RBP10.38□□□□□ -0.75
CPSF6-204ENST00000547486 FAM89BQ8N5H3 189 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 MINDY2Q8NBR6 621 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 OR6M1Q8NGM8 313 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 ABHD14BQ96IU4 210 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 OR5B12Q96R08 314 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 PRR25Q96S07 402 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 CHCHD6Q9BRQ6 235 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 AGMATQ9BSE5 352 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 PARP11Q9NR21 331 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 SLC23A1Q9UHI7 598 aa10.38□□□□□ -0.75
CPSF6-204ENST00000547486 LSM4Q9Y4Z0 139 aaKnown RBP10.38□□□□□ -0.75
CPSF6-204ENST00000547486 TRAV41A0A0B4J266 112 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 SEC14L6B5MCN3 397 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 RAB29O14966 203 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 RAMP3O60896 148 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 SCTP09683 121 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 HSMCR30P0CW71 290 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
CPSF6-204ENST00000547486 ARSBP15848 533 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 CEACAM6P40199 344 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 RAB9AP51151 201 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 GNB1P62873 340 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 NDPQ00604 133 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 PLA2G7Q13093 441 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 C19orf54Q5BKX5 351 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 C9orf66Q5T8R8 295 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 TMEM65Q6PI78 240 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 OR1N2Q8NGR9 330 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 UFD1Q92890 307 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 C11orf54Q9H0W9 315 aaPredicted RBP10.37□□□□□ -0.75
CPSF6-204ENST00000547486 PIPOXQ9P0Z9 390 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 OR1A1Q9P1Q5 309 aa10.37□□□□□ -0.75
CPSF6-204ENST00000547486 IGKV1-6A0A0C4DH72 117 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 H0YJW9 148 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 SLC17A2O00624 439 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 SOX15O60248 233 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ECI1P42126 302 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 MAP2K4P45985 399 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 CLDN12P56749 244 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 LINC00205P59089 165 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 CX3CL1P78423 397 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 RUNX1Q01196 453 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 FABP5Q01469 135 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ZNF260Q3ZCT1 412 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 FAM71F2Q6NXP2 309 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 DRAXINQ8NBI3 349 aaPredicted RBP10.36□□□□□ -0.75
CPSF6-204ENST00000547486 CASTOR1Q8WTX7 329 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ARHGAP5-AS1Q96IT6 56 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ALX4Q9H161 411 aaPredicted RBP10.36□□□□□ -0.75
CPSF6-204ENST00000547486 RIMS4Q9H426 269 aaPredicted RBP10.36□□□□□ -0.75
CPSF6-204ENST00000547486 FBXL15Q9H469 300 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 PLGRKTQ9HBL7 147 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 Q9N2K0 584 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ZMAT5Q9UDW3 170 aaKnown RBP10.36□□□□□ -0.75
CPSF6-204ENST00000547486 RNF150Q9ULK6 438 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 VSIG4Q9Y279 399 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 TPRKBQ9Y3C4 175 aa10.36□□□□□ -0.75
CPSF6-204ENST00000547486 ITGB1BP1O14713 200 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 RRHO14718 337 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 RGS10O43665 173 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 CPEP16870 476 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 CRHBPP24387 322 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 VEGFCP49767 419 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 RAB11BQ15907 218 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 C2orf76Q3KRA6 126 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 PLAC9Q5JTB6 97 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
CPSF6-204ENST00000547486 MOB1BQ7L9L4 216 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 OR5AN1Q8NGI8 311 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 URM1Q9BTM9 101 aaKnown RBP10.35□□□□□ -0.75
CPSF6-204ENST00000547486 PECRQ9BY49 303 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 ISYNA1Q9NPH2 558 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 KIAA1456Q9P272 454 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 HSF4Q9ULV5 492 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 GAB2Q9UQC2 676 aa10.35□□□□□ -0.75
CPSF6-204ENST00000547486 NUBP2Q9Y5Y2 271 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms