RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PIPOXQ9P0Z9 390 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 RNF150Q9ULK6 438 aa13.5□□□□□ -0.25
LTBR-215ENST00000546296 TRBV6-7A0A0A0MS04 114 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 IGHV3-72A0A0B4J1Y9 119 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 RAB29O14966 203 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 DIRAS3O95661 229 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 CTXN2P0C2S0 81 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 PRSS3P35030 304 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 ARPC4P59998 168 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 HNF4GQ14541 408 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 AWAT1Q58HT5 328 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 CNIH2Q6PI25 160 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 HOGA1Q86XE5 327 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 GVQW1Q8N7I0 195 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 CFHR4Q92496 578 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 ABHD14BQ96IU4 210 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 AKR1E2Q96JD6 320 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 IFI27L2Q9H2X8 130 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 GHITMQ9H3K2 345 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 IFT46Q9NQC8 304 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 CCDC59Q9P031 241 aaKnown RBP13.49□□□□□ -0.25
LTBR-215ENST00000546296 ANXA10Q9UJ72 324 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 ZNF221Q9UK13 617 aa13.49□□□□□ -0.25
LTBR-215ENST00000546296 RBM7Q9Y580 266 aaKnown RBP13.49□□□□□ -0.25
LTBR-215ENST00000546296 SAA2-SAA4A0A096LPE2 208 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 MEIS3P1A6NDR6 274 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 FAM90A9PA6NNJ1 464 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 IGKV1D-33P01593 117 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 IGKV1-33P01594 117 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 FCER2P06734 321 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 SAA2P0DJI9 122 aaPredicted RBP13.48□□□□□ -0.25
LTBR-215ENST00000546296 MDKP21741 143 aaPredicted RBP13.48□□□□□ -0.25
LTBR-215ENST00000546296 GPR12P47775 334 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 COMPP49747 757 aaPredicted RBP13.48□□□□□ -0.25
LTBR-215ENST00000546296 Q6ZSV7 163 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 SNX29P2Q8IUI4 249 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 ODF3L1Q8IXM7 274 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 C3orf56Q8N813 242 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 BEST4Q8NFU0 473 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 SLC25A33Q9BSK2 321 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 RSL24D1Q9UHA3 163 aaKnown RBP13.48□□□□□ -0.25
LTBR-215ENST00000546296 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
LTBR-215ENST00000546296 A0A1B0GUS0 222 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 OR2F2O95006 317 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 HLA-DQB1P01920 261 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 OR8U9P0C7N5 309 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 TMEM11P17152 192 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 CD1BP29016 333 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 ZNF833PQ6ZTB9 187 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 OR2T10Q8NGZ9 312 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 OR8U1Q8NH10 309 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 RBM14Q96PK6 669 aaKnown RBP13.47□□□□□ -0.25
LTBR-215ENST00000546296 AGMATQ9BSE5 352 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 MRPL20Q9BYC9 149 aaKnown RBP13.47□□□□□ -0.25
LTBR-215ENST00000546296 TOLLIPQ9H0E2 274 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 EXTL2Q9UBQ6 330 aa13.47□□□□□ -0.25
LTBR-215ENST00000546296 CLPSL1A2RUU4 121 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 CTDSP2O14595 271 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 TSPAN9O75954 239 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 HABP2Q14520 560 aaPredicted RBP13.46□□□□□ -0.25
LTBR-215ENST00000546296 RPL39P5Q59GN2 51 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 ARSJQ5FYB0 599 aaPredicted RBP13.46□□□□□ -0.25
LTBR-215ENST00000546296 FAM71F2Q6NXP2 309 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 LINC01006Q8NI28 216 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 PRSS22Q9GZN4 317 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 C6orf62Q9GZU0 229 aaPredicted RBP13.46□□□□□ -0.25
LTBR-215ENST00000546296 C16orf95Q9H693 158 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 RANBP3Q9H6Z4 567 aaPredicted RBP13.46□□□□□ -0.25
LTBR-215ENST00000546296 MMP24Q9Y5R2 645 aa13.46□□□□□ -0.25
LTBR-215ENST00000546296 ZNF736B4DX44 427 aaPredicted RBP13.45□□□□□ -0.26
LTBR-215ENST00000546296 J3QRK9 145 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 MOSP00540 346 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 NFYAP23511 347 aaPredicted RBP13.45□□□□□ -0.26
LTBR-215ENST00000546296 LSAMPQ13449 338 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 FBLN7Q53RD9 439 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 H1FOOQ8IZA3 346 aaPredicted RBP13.45□□□□□ -0.26
LTBR-215ENST00000546296 OR2T6Q8NHC8 308 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 EAF1Q96JC9 268 aaPredicted RBP13.45□□□□□ -0.26
LTBR-215ENST00000546296 NABP2Q9BQ15 211 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 NECAP2Q9NVZ3 263 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 RNF114Q9Y508 228 aa13.45□□□□□ -0.26
LTBR-215ENST00000546296 NCBP2LA6PVI3 153 aaKnown RBP13.44□□□□□ -0.26
LTBR-215ENST00000546296 M0QZK8 103 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 ZNF701M0R085 212 aaPredicted RBP13.44□□□□□ -0.26
LTBR-215ENST00000546296 HAX1O00165 279 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 BLCAPP62952 87 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 EBI3Q14213 229 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 LAX1Q8IWV1 398 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 MCFD2Q8NI22 146 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 C15orf40Q8WUR7 153 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 ZNF251Q9BRH9 671 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 DCUN1D5Q9BTE7 237 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 SLIRPQ9GZT3 109 aaKnown RBP13.44□□□□□ -0.26
LTBR-215ENST00000546296 RBM38Q9H0Z9 239 aaKnown RBP13.44□□□□□ -0.26
LTBR-215ENST00000546296 OR2D2Q9H210 308 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 MIXL1Q9H2W2 232 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 SCPEP1Q9HB40 452 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 SIGLEC9Q9Y336 463 aa13.44□□□□□ -0.26
LTBR-215ENST00000546296 MOB4Q9Y3A3 225 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms