RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 TMEM187Q14656 261 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF573Q86YE8 665 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 FAM89BQ8N5H3 189 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 H1FXQ92522 213 aaKnown RBP8.38□□□□□ -1.07
TRAF1-203ENST00000546084 ZNF665Q9H7R5 613 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 MTCH1Q9NZJ7 389 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 ATMQ13315 3056 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TLN2Q9Y4G6 2542 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TGIF2-C20orf24A0A0A6YYL0 155 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 A0A1W2PPV4 95 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 IL13RA2Q14627 380 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 WDR25Q64LD2 544 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-203ENST00000546084 SNIP1Q8TAD8 396 aaKnown RBP8.38□□□□□ -1.07
TRAF1-203ENST00000546084 M1APQ8TC57 530 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 NTNG2Q96CW9 530 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 PLEKHF2Q9H8W4 249 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TUBD1Q9UJT1 453 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 ADAMTS9Q9P2N4 1935 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 MARCH11A6NNE9 402 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 FCGR3BO75015 233 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TOX4O94842 621 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 RSPO1Q2MKA7 263 aaPredicted RBP8.38□□□□□ -1.07
TRAF1-203ENST00000546084 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 UBALD2Q8IYN6 164 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 EDARADDQ8WWZ3 215 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 TMEM37Q8WXS4 190 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 FER1L6-AS2Q96M78 137 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 PCED1AQ9H1Q7 454 aa8.38□□□□□ -1.07
TRAF1-203ENST00000546084 LTBP2Q14767 1821 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 A0A0U1RQV5 110 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 C20orf202A1L168 122 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 SYNGR3O43761 229 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 CST2P09228 141 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PYY3Q5JQD4 70 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 ZCCHC24Q8N2G6 241 aaKnown RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 TMEM252Q8N6L7 170 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 SERTAD4Q9NUC0 356 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 MALRD1Q5VYJ5 2156 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 CHRNA7P36544 502 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PPP1CBP62140 327 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 TLE4Q04727 773 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PRAMEF5Q5TYX0 476 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 GFI1BQ5VTD9 330 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 NABP1Q96AH0 204 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 RTL8AQ9BWD3 113 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 TUBA4BQ9H853 241 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 TMED3Q9Y3Q3 217 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 DMDP11532 3685 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 IGLV3-12A0A075B6K2 115 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 SLC25A17O43808 307 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 HSPB1P04792 205 aaKnown RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PINX1Q96BK5 328 aaKnown RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 GINS3Q9BRX5 216 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 EGLN1Q9GZT9 426 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 PATZ1Q9HBE1 687 aaKnown RBP8.37□□□□□ -1.07
TRAF1-203ENST00000546084 ENY2Q9NPA8 101 aa8.37□□□□□ -1.07
TRAF1-203ENST00000546084 IGSF23A1L1A6 192 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 FAM157AC9JC47 383 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SH2D1BO14796 132 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 ENSAO43768 121 aaKnown RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 FKBP2P26885 142 aaKnown RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 CDX1P47902 265 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 CDPF1Q6NVV7 123 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SPNS3Q6ZMD2 512 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 Q8WTZ3 238 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SSMEM1Q8WWF3 244 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SMIM7Q9BQ49 75 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 KLF13Q9Y2Y9 288 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 LY6G6EA0A0G2JKS1 128 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 C9orf172C9J069 976 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 M0R1X1 148 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SIAH2O43255 324 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 IGHV2-5P01817 119 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 CD55P08174 381 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 PMELP40967 661 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 LBHQ53QV2 105 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 PRR31Q5SQ13 230 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 WFDC8Q8IUA0 241 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SNX22Q96L94 193 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 OR5B12Q96R08 314 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 PARD6GQ9BYG4 376 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 WDR54Q9H977 334 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SEBOXQ9HB31 216 aaPredicted RBP8.36□□□□□ -1.07
TRAF1-203ENST00000546084 TP53TG5Q9Y2B4 290 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 U3KQA8 63 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 NPIPB13A6NJU9 1138 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 NPIPB4C9JG80 1138 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 IGHV2-70P01814 119 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 STAG3L3P0CL85 134 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SSTR5P35346 364 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 HEPN1Q6WQI6 88 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 SCCPDHQ8NBX0 429 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 LAMP3Q9UQV4 416 aa8.36□□□□□ -1.07
TRAF1-203ENST00000546084 LRRC3CA6NJW4 275 aa8.35□□□□□ -1.07
TRAF1-203ENST00000546084 WISP2O76076 250 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms