RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 MORN2Q502X0 79 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 YIF1BQ5BJH7 314 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 C6orf183Q5T699 404 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 AWAT2Q6E213 333 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 OR5M8Q8NGP6 311 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 ISOC1Q96CN7 298 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 MRPS24Q96EL2 167 aaKnown RBP6.6□□□□□ -1.35
USP28-215ENST00000545608 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 OR14A2Q96R54 314 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 ANKRD60Q9BZ19 345 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 SELENOIQ9C0D9 397 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 WDR12Q9GZL7 423 aaKnown RBP6.6□□□□□ -1.35
USP28-215ENST00000545608 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 TAF9BQ9HBM6 251 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 SPACA1Q9HBV2 294 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 OR2S2Q9NQN1 319 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 CKLFQ9UBR5 152 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 ZNF107Q9UII5 783 aaPredicted RBP6.6□□□□□ -1.35
USP28-215ENST00000545608 WSB1Q9Y6I7 421 aa6.6□□□□□ -1.35
USP28-215ENST00000545608 SEC14L6B5MCN3 397 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 G3V318 75 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CA11O75493 328 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CRTAPO75718 401 aaPredicted RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 SC5DO75845 299 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 NHLRC4P0CG21 123 aaPredicted RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 MGMTP16455 207 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 FUT3P21217 361 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CNTFRP26992 372 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 PPIFP30405 207 aaKnown RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 SERPINB10P48595 397 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 ST3GAL4Q11206 333 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 FHL3Q13643 280 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 MMDQ15546 238 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 TMEM30BQ3MIR4 351 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 LAIR2Q6ISS4 152 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 TRAT1Q6PIZ9 186 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CDH26Q8IXH8 852 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CENPSQ8N2Z9 138 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 OR11H1Q8NG94 326 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 MRPL30Q8TCC3 161 aaKnown RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 MYOZ3Q8TDC0 251 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 CYGBQ8WWM9 190 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 DERL3Q96Q80 235 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 ASCL2Q99929 193 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 RAB9BQ9NP90 201 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
USP28-215ENST00000545608 ZNF580Q9UK33 172 aa6.59□□□□□ -1.35
USP28-215ENST00000545608 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 IGHV7-81A0A0B4J1V7 117 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 FAM90A10PA6NDY2 464 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 FAM90A7PA6NKC0 464 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 TRIM64CA6NLI5 447 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 FAM90A23PA8MXZ1 464 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 BOLA2-SMG1P6H3BVE0 249 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 YPEL1O60688 119 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 PDCD6O75340 191 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 GLAP06280 429 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 OR5H8P0DN80 308 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 CELP19835 753 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 PPP1CCP36873 323 aaKnown RBP6.58□□□□□ -1.36
USP28-215ENST00000545608 CAPGP40121 348 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 OR3A3P47888 321 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ACTBP60709 375 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ZNF260Q3ZCT1 412 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 TTC23Q5W5X9 447 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ZNF491Q8N8L2 437 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 OR1N2Q8NGR9 330 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 RAB2BQ8WUD1 216 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 FAM46BQ96A09 425 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 YPEL2Q96QA6 119 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 OR5B12Q96R08 314 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 BCL7BQ9BQE9 202 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ABHD14AQ9BUJ0 271 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 OR51J1Q9H342 316 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ZMAT4Q9H898 229 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 KCNIP1Q9NZI2 227 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 JPT1Q9UK76 154 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 ERGIC3Q9Y282 383 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 U3KQK5 164 aa6.58□□□□□ -1.36
USP28-215ENST00000545608 EFCAB10A6NFE3 127 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 I3L521 148 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 ATP6V0E1O15342 81 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 HLA-DRB1P01911 266 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 CD1AP06126 327 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 RAB9AP51151 201 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 TAS2R43P59537 309 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 ARPC4P59998 168 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 GNB1P62873 340 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 HTD2P86397 168 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 INSL4Q14641 139 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 C6orf141Q5SZD1 244 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 OR10K2Q6IF99 312 aa6.57□□□□□ -1.36
USP28-215ENST00000545608 LIN54Q6MZP7 749 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms