RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 P2RX4Q99571 388 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 RIF1Q5UIP0 2472 aaKnown RBP11.02□□□□□ -0.65
CHD4-211ENST00000544484 CTXND1A0A1B0GTU2 59 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 PLAUP00749 431 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 RNF224P0DH78 156 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 RPL30P62888 115 aaKnown RBP11.02□□□□□ -0.65
CHD4-211ENST00000544484 RIPPLY2Q5TAB7 128 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 TMEM252Q8N6L7 170 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 STARD4Q96DR4 205 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 SNX22Q96L94 193 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 TIMP4Q99727 224 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 HOXD4P09016 255 aaPredicted RBP11.02□□□□□ -0.65
CHD4-211ENST00000544484 SEC11BP0C7V7 166 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 ZNF596Q8TC21 504 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 PARP11Q9NR21 331 aa11.02□□□□□ -0.65
CHD4-211ENST00000544484 EIF3GO75821 320 aaKnown RBP eCLIP11.01□□□□□ -0.656e-9■■■■□ 22.8
CHD4-211ENST00000544484 CRYBA2P53672 197 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 ERVFRD-1P60508 538 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 OVCH2Q7RTZ1 564 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 RPL27AP46776 148 aaKnown RBP11.01□□□□□ -0.65
CHD4-211ENST00000544484 P2RY4P51582 365 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 TRAF4Q9BUZ4 470 aaPredicted RBP11.01□□□□□ -0.65
CHD4-211ENST00000544484 KLF4O43474 513 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 WDR73Q6P4I2 378 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 SEC11CQ9BY50 192 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 AICDAQ9GZX7 198 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 CXorf1O96002 111 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 SUCLG1P53597 346 aaKnown RBP11.01□□□□□ -0.65
CHD4-211ENST00000544484 IZUMO4Q1ZYL8 232 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 SLC16A13Q7RTY0 426 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 HSF4Q9ULV5 492 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 SIGLEC5O15389 551 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 SLC25A53Q5H9E4 307 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 C19orf48Q6RUI8 117 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 CLEC2AQ6UVW9 174 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 TMEM222Q9H0R3 208 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 FUT9Q9Y231 359 aa11.01□□□□□ -0.65
CHD4-211ENST00000544484 TEX50A0A1B0GTY4 177 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ODAMA1E959 279 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ZIC3O60481 467 aa11□□□□□ -0.65
CHD4-211ENST00000544484 PRSS1P07477 247 aa11□□□□□ -0.65
CHD4-211ENST00000544484 OR10J1P30954 320 aa11□□□□□ -0.65
CHD4-211ENST00000544484 UNC119Q13432 240 aa11□□□□□ -0.65
CHD4-211ENST00000544484 IFI6P09912 130 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ZNF137PP52743 207 aa11□□□□□ -0.65
CHD4-211ENST00000544484 C1orf174Q8IYL3 243 aa11□□□□□ -0.65
CHD4-211ENST00000544484 OR1L6Q8NGR2 347 aa11□□□□□ -0.65
CHD4-211ENST00000544484 CHODLQ9H9P2 273 aa11□□□□□ -0.65
CHD4-211ENST00000544484 RBBP6Q7Z6E9 1792 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 INTS1Q8N201 2190 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 BRCA1P38398 1863 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 H0Y980 276 aa11□□□□□ -0.65
CHD4-211ENST00000544484 PITX3O75364 302 aa11□□□□□ -0.65
CHD4-211ENST00000544484 PGLYRP1O75594 196 aaPredicted RBP11□□□□□ -0.65
CHD4-211ENST00000544484 HIST3H3Q16695 136 aa11□□□□□ -0.65
CHD4-211ENST00000544484 AQP3Q92482 292 aa11□□□□□ -0.65
CHD4-211ENST00000544484 M0R2Z0 102 aa11□□□□□ -0.65
CHD4-211ENST00000544484 GAPDHP04406 335 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 RPL29P47914 159 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 KCNMB1Q16558 191 aa11□□□□□ -0.65
CHD4-211ENST00000544484 C16orf82Q7Z2V1 217 aa11□□□□□ -0.65
CHD4-211ENST00000544484 DIRC2Q96SL1 478 aa11□□□□□ -0.65
CHD4-211ENST00000544484 NPVFQ9HCQ7 196 aa11□□□□□ -0.65
CHD4-211ENST00000544484 CHCHD2Q9Y6H1 151 aaPredicted RBP11□□□□□ -0.65
CHD4-211ENST00000544484 MDKP21741 143 aaPredicted RBP11□□□□□ -0.65
CHD4-211ENST00000544484 IER3P46695 156 aa11□□□□□ -0.65
CHD4-211ENST00000544484 GLIPR1P48060 266 aa11□□□□□ -0.65
CHD4-211ENST00000544484 FGFRL1Q8N441 504 aa11□□□□□ -0.65
CHD4-211ENST00000544484 SIRT7Q9NRC8 400 aa11□□□□□ -0.65
CHD4-211ENST00000544484 CALYQ9NYX4 217 aa11□□□□□ -0.65
CHD4-211ENST00000544484 METTL1Q9UBP6 276 aaKnown RBP11□□□□□ -0.65
CHD4-211ENST00000544484 TRBV23-1A0A0A0MS06 115 aa11□□□□□ -0.65
CHD4-211ENST00000544484 IGSF23A1L1A6 192 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ZNF345Q14585 488 aa11□□□□□ -0.65
CHD4-211ENST00000544484 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ZNF645Q8N7E2 425 aa11□□□□□ -0.65
CHD4-211ENST00000544484 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
CHD4-211ENST00000544484 PXMP4Q9Y6I8 212 aa11□□□□□ -0.65
CHD4-211ENST00000544484 IGKV1D-43A0A0B4J1Z2 117 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 CEACAM18A8MTB9 384 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 TFPI2P48307 235 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 ARF6P62330 175 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 TUSC1Q2TAM9 212 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 OR10C1Q96KK4 312 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 POLEQ07864 2286 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 TRAV20A0A0B4J274 112 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 DEDDO75618 318 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 RECKO95980 971 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 G0S2P27469 103 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 KHDC3LQ587J8 217 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 GUCD1Q96NT3 240 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 PAXXQ9BUH6 204 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 AP4M1O00189 453 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 PDE6DO43924 150 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 LOXL3P58215 753 aa10.99□□□□□ -0.65
CHD4-211ENST00000544484 HLA-DRB5Q30154 266 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms