RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 SRPXP78539 464 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 CLINT1Q14677 625 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 SLC35E4Q6ICL7 350 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 NEUROG1Q92886 237 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 KIRREL1Q96J84 757 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 SCRT1Q9BWW7 348 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 FAM212BQ9NTI7 297 aaPredicted RBP11.96□□□□□ -0.5
VPS33A-209ENST00000544349 OR1A1Q9P1Q5 309 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 RNF7Q9UBF6 113 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 EPG5Q9HCE0 2579 aa11.96□□□□□ -0.5
VPS33A-209ENST00000544349 IGKV1D-17A0A075B6S4 117 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 BORCS7-ASMTA0A0B4J1R7 106 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 A0A0G2JRQ6 117 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 TMEM30CPA0ZSE6 113 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 TMEM50AO95807 157 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 CD55P08174 381 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 UCP1P25874 307 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-209ENST00000544349 TMEM182Q6ZP80 229 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-209ENST00000544349 OR2C3Q8N628 320 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 UBALD1Q8TB05 177 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 Q8TCH9 128 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-209ENST00000544349 IGHV3OR15-7A0A075B7D8 119 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 A0A1B0GV50 99 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 OMGP23515 440 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 DVL1P1P54792 670 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-209ENST00000544349 TLE1Q04724 770 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 TFF3Q07654 80 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 AESQ08117 197 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 COQ2Q96H96 371 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 AKR1E2Q96JD6 320 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 C19orf12Q9NSK7 152 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 ZFP57Q9NU63 452 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 CACFD1Q9UGQ2 172 aa11.95□□□□□ -0.5
VPS33A-209ENST00000544349 DYSFO75923 2080 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 ZNF737O75373 536 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 TSPAN15O95858 294 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 PLAUP00749 431 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 TNFRSF1AP19438 455 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 PVALBP20472 110 aaPredicted RBP11.94□□□□□ -0.5
VPS33A-209ENST00000544349 APOBEC3AP31941 199 aaPredicted RBP11.94□□□□□ -0.5
VPS33A-209ENST00000544349 SNCAP37840 140 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 CAMLGP49069 296 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 PPT1P50897 306 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 CCL8P80075 99 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 GNMTQ14749 295 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 HMGN3Q15651 99 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 H1FOOQ8IZA3 346 aaPredicted RBP11.94□□□□□ -0.5
VPS33A-209ENST00000544349 OR10J5Q8NHC4 309 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 FAM222BQ8WU58 562 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 CACNA1DQ01668 2161 aa11.94□□□□□ -0.5
VPS33A-209ENST00000544349 DIDO1Q9BTC0 2240 aaKnown RBP11.94□□□□□ -0.5
VPS33A-209ENST00000544349 NPIPB11E5RHQ5 1161 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 SIAH2O43255 324 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PGLYRP1O75594 196 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PPP1CCP36873 323 aaKnown RBP11.93□□□□□ -0.5
VPS33A-209ENST00000544349 GABRA2P47869 451 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PPP1R3CQ9UQK1 317 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PRELID1Q9Y255 219 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 RNF115Q9Y4L5 304 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 HCFC1P51610 2035 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 H0Y980 276 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 K7N7A8 449 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PITX3O75364 302 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 CYB5R3P00387 301 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-209ENST00000544349 EPHA1P21709 976 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 AKR1C3P42330 323 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 UQCRFS1P47985 274 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 PAX5Q02548 391 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 TESK1Q15569 626 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 C4orf17Q53FE4 359 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 KRBOX4Q5JUW0 171 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 ZNF295-AS1Q8N0V1 137 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 OR51H1Q8NH63 302 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 IL1F10Q8WWZ1 152 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 ABHD14AQ9BUJ0 271 aa11.93□□□□□ -0.5
VPS33A-209ENST00000544349 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
VPS33A-209ENST00000544349 CLEC18AA5D8T8 446 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 IGLV2-14P01704 120 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 GNLYP22749 145 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 EFNB3Q15768 340 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 AKIRIN2Q53H80 203 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 TGIF2LYQ8IUE0 185 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 PRR18Q8N4B5 295 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 TMEM252Q8N6L7 170 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 CLEC18CQ8NCF0 446 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 SNX22Q96L94 193 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 AIFM2Q9BRQ8 373 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 KCNIP1Q9NZI2 227 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 OOEPA6NGQ2 149 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 CST7O76096 145 aa11.92□□□□□ -0.5
VPS33A-209ENST00000544349 PRH1P02810 166 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms