RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 C20orf24Q9BUV8 137 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 FUNDC2Q9BWH2 189 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 FAM234AQ9H0X4 552 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 C1RLQ9NZP8 487 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 KAAG1Q9UBP8 84 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 CLN8Q9UBY8 286 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 OR5V1Q9UGF6 321 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 MRPS28Q9Y2Q9 187 aaKnown RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 TANC2Q9HCD6 1990 aa4.2□□□□□ -1.74
CLIP1-217ENST00000543205 CHD3Q12873 2000 aaKnown RBP4.2□□□□□ -1.74
CLIP1-217ENST00000543205 IGKV1D-17A0A075B6S4 117 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 LOC105371242A0A075B767 164 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 TRAV1-2A0A0B4J238 106 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 TRAV24A0A0B4J272 114 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 DVL1O14640 695 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 RRHO14718 337 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SH2D1BO14796 132 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SIVA1O15304 175 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 RS1O15537 224 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 PHF1O43189 567 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CD5LO43866 347 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF780AO75290 641 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 OR2F2O95006 317 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CDRT1O95170 752 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 LY6G6DO95868 133 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 TFF1P04155 84 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 MSMBP08118 114 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SERPINA2P20848 420 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GADD45AP24522 165 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 FGF9P31371 208 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 RANBP1P43487 201 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CDC34P49427 236 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SEC61A1P61619 476 aaKnown RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 PAX5Q02548 391 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 MADCAM1Q13477 382 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SLC22A6Q4U2R8 563 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SPIN3Q5JUX0 258 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CRIP3Q6Q6R5 217 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GLIPR1L1Q6UWM5 242 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 C19orf35Q6ZS72 473 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 C1QL2Q7Z5L3 287 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GLCCI1Q86VQ1 547 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF561Q8N587 486 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CD177Q8N6Q3 437 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 FAM216BQ8N7L0 139 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 OR10K1Q8NGX5 313 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 YIPF6Q96EC8 236 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 KCTD7Q96MP8 289 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GAFA1Q96PS6 74 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 NPFFR1Q9GZQ6 430 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 OR51E2Q9H255 320 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 PLGRKTQ9HBL7 147 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 HMG20AQ9NP66 347 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 TXNL4BQ9NX01 149 aaKnown RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 CTSZQ9UBR2 303 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 AK6Q9Y3D8 172 aaKnown RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 COL6A5A8TX70 2615 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 E5RGE8 158 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 DEGS1O15121 323 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SIGLEC5O15389 551 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 AIREO43918 545 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 HAND1O96004 215 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 UBBP0CG47 229 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GTF2F2P13984 249 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 NDUFB7P17568 137 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 RAB3BP20337 219 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZFP36P26651 326 aaKnown RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 HTR2CP28335 458 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 DVL1P1P54792 670 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 FGF12P61328 243 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 COL10A1Q03692 680 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF146Q15072 292 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 WDR25Q64LD2 544 aaPredicted RBP4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ELP2Q6IA86 826 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 BTNL3Q6UXE8 466 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GDPGP1Q6ZNW5 385 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF788Q6ZQV5 615 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GPR141Q7Z602 305 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 OSR2Q8N2R0 312 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNRF1Q8ND25 227 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 OR6M1Q8NGM8 313 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 PHF21AQ96BD5 680 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 SDSLQ96GA7 329 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 IL36GQ9NZH8 169 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 MBD2Q9UBB5 411 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 IL36RNQ9UBH0 155 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 GHRLQ9UBU3 117 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 ZNF222Q9UK12 451 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 KCNS2Q9ULS6 477 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 NSG2Q9Y328 171 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 V9GY05 133 aa4.19□□□□□ -1.74
CLIP1-217ENST00000543205 FN1P02751 2386 aaKnown RBP4.18□□□□□ -1.74
CLIP1-217ENST00000543205 TRGV11A0A075B6L2 103 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 A0A0G2JMP0 313 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 A0A0X1KG70 313 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 A0A1B0GW55 424 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 A8MXK9 166 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 SIRPB1O00241 398 aa4.18□□□□□ -1.74
CLIP1-217ENST00000543205 SLC17A2O00624 439 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms