RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 RBM48Q5RL73 367 aaKnown RBP15.39■□□□□ 0.05
DDX11-220ENST00000542244 LIN54Q6MZP7 749 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 ZNF554Q86TJ5 538 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 NEDD4LQ96PU5 975 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 TM2D1Q9BX74 207 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 CST11Q9H112 138 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 VSIG4Q9Y279 399 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 A3GALT2U3KPV4 340 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 U3KQK5 164 aa15.39■□□□□ 0.05
DDX11-220ENST00000542244 TMEM14DPA8MWL7 114 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 CX3CL1P78423 397 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 RUNX1Q01196 453 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 P2RY14Q15391 338 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 LY6G6FQ5SQ64 297 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 CEACAM19Q7Z692 300 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 OR2AK2Q8NG84 335 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 SETD6Q8TBK2 473 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 DLX4Q92988 240 aaPredicted RBP15.38■□□□□ 0.05
DDX11-220ENST00000542244 FAM103A1Q9BTL3 118 aaKnown RBP15.38■□□□□ 0.05
DDX11-220ENST00000542244 TMEM59Q9BXS4 323 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 LPAR5Q9H1C0 372 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 TPSG1Q9NRR2 321 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 GHRLQ9UBU3 117 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 AK3Q9UIJ7 227 aa15.38■□□□□ 0.05
DDX11-220ENST00000542244 ZNF256Q9Y2P7 627 aaPredicted RBP15.38■□□□□ 0.05
DDX11-220ENST00000542244 PTGES3LE9PB15 166 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 CASQ2O14958 399 aaPredicted RBP15.37■□□□□ 0.05
DDX11-220ENST00000542244 SLC22A1O15245 554 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 MAPK3P27361 379 aaPredicted RBP15.37■□□□□ 0.05
DDX11-220ENST00000542244 ZNF616Q08AN1 781 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 PLA2G7Q13093 441 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 TMEM65Q6PI78 240 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 DRAXINQ8NBI3 349 aaPredicted RBP15.37■□□□□ 0.05
DDX11-220ENST00000542244 TMEM203Q969S6 136 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 AGMATQ9BSE5 352 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 C8orf4Q9NR00 106 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 ERGIC3Q9Y282 383 aa15.37■□□□□ 0.05
DDX11-220ENST00000542244 IGHV4OR15-8A0A075B7B6 117 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 A0A087WW49 117 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 A0A1W2PN81 502 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 FOXI3A8MTJ6 420 aaPredicted RBP15.36■□□□□ 0.05
DDX11-220ENST00000542244 H0YJW9 148 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 OR5H8P0DN80 308 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 SRMP19623 302 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 CHRNA7P36544 502 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 GLT8D1Q68CQ7 371 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 TMEM91Q6ZNR0 172 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 CLCC1Q96S66 551 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 C11orf54Q9H0W9 315 aaPredicted RBP15.36■□□□□ 0.05
DDX11-220ENST00000542244 CHMP1AQ9HD42 196 aaPredicted RBP15.36■□□□□ 0.05
DDX11-220ENST00000542244 NKX1-2Q9UD57 310 aaPredicted RBP15.36■□□□□ 0.05
DDX11-220ENST00000542244 SLC23A1Q9UHI7 598 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 RNF150Q9ULK6 438 aa15.36■□□□□ 0.05
DDX11-220ENST00000542244 IGKV1-6A0A0C4DH72 117 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 RRHO14718 337 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 LY86O95711 162 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 SCTP09683 121 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 UCHL1P09936 223 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 OR8U8P0C7N1 319 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 NHLRC4P0CG21 123 aaPredicted RBP15.35■□□□□ 0.05
DDX11-220ENST00000542244 UBBP0CG47 229 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 TMEM50BP56557 158 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 RPS25P62851 125 aaKnown RBP15.35■□□□□ 0.05
DDX11-220ENST00000542244 IRF3Q14653 427 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 HAPLN4Q86UW8 402 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 PHYHIPQ92561 330 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 ISYNA1Q9NPH2 558 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 NUBP2Q9Y5Y2 271 aa15.35■□□□□ 0.05
DDX11-220ENST00000542244 RGS11O94810 467 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 IGHV3-11P01762 117 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 CRIP2P52943 208 aaPredicted RBP15.34■□□□□ 0.05
DDX11-220ENST00000542244 CLDN12P56749 244 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 SPHARQ15513 63 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 HSD17B12Q53GQ0 312 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 LIPKQ5VXJ0 399 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 RNLSQ5VYX0 342 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 OVCH2Q7RTZ1 564 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 SBSPONQ8IVN8 264 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 MS4A15Q8N5U1 240 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 KCNG3Q8TAE7 436 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 MS4A10Q96PG2 267 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 CHCHD6Q9BRQ6 235 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 MND1Q9BWT6 205 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 TOLLIPQ9H0E2 274 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 ABRACLQ9P1F3 81 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 ZMAT5Q9UDW3 170 aaKnown RBP15.34■□□□□ 0.05
DDX11-220ENST00000542244 STEAP1Q9UHE8 339 aa15.34■□□□□ 0.05
DDX11-220ENST00000542244 AK6Q9Y3D8 172 aaKnown RBP15.34■□□□□ 0.05
DDX11-220ENST00000542244 OVOL1O14753 267 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 SPNP16150 400 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 DCTN2Q13561 401 aaKnown RBP15.33■□□□□ 0.04
DDX11-220ENST00000542244 MED22Q15528 200 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 OR5AN1Q8NGI8 311 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 PLEKHJ1Q9NW61 149 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 KIAA1456Q9P272 454 aa15.33■□□□□ 0.04
DDX11-220ENST00000542244 STAB2Q8WWQ8 2551 aa15.32■□□□□ 0.04
DDX11-220ENST00000542244 RAB29O14966 203 aa15.32■□□□□ 0.04
DDX11-220ENST00000542244 BPNT1O95861 308 aa15.32■□□□□ 0.04
DDX11-220ENST00000542244 IGKV1-16P04430 117 aa15.32■□□□□ 0.04
DDX11-220ENST00000542244 CD3GP09693 182 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms