RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 MPTX1A8MV57 137 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 ODF3BA8MYP8 253 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 SYT7O43581 403 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 GAS8-AS1O95177 125 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 RBP4P02753 201 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 CCL3L1P16619 93 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 KIR2DS4P43632 304 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 EFNB2P52799 333 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 CBX3Q13185 183 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 TMED1Q13445 227 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 BATF2Q8N1L9 274 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 OR10H4Q8NGA5 316 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 OR4M1Q8NGD0 313 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 C10orf35Q96D05 121 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 CENPNQ96H22 339 aaPredicted RBP6.33□□□□□ -1.4
MRPS35-204ENST00000542199 CEP19Q96LK0 163 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 ATP6V0BQ99437 205 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 TBX5Q99593 518 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 OSBPL10Q9BXB5 764 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 GFRA4Q9GZZ7 299 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 RANBP3Q9H6Z4 567 aaPredicted RBP6.33□□□□□ -1.4
MRPS35-204ENST00000542199 PLEKHA1Q9HB21 404 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 RAB18Q9NP72 206 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.33□□□□□ -1.4
MRPS35-204ENST00000542199 SLC7A11Q9UPY5 501 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 SIGLEC9Q9Y336 463 aa6.33□□□□□ -1.4
MRPS35-204ENST00000542199 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 LOC107986453A0A1B0GWG9 222 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 FAM230AA0A1W2PPH8 454 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 SRRM4A7MD48 611 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 E9PQ18 207 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 J3QRE1 110 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 CHST1O43916 411 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 CLN5O75503 358 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 GATBO75879 557 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 ATP5HO75947 161 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 UBCP0CG48 685 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 COX7A1P24310 79 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 PAX6P26367 422 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 KIR3DL2P43630 455 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 CDC42P60953 191 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 ZNF85Q03923 595 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 GPR50Q13585 617 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 FCN2Q15485 313 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 LY6EQ16553 131 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 SLC25A30Q5SVS4 291 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 LDLRAD2Q5SZI1 272 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 Q6ZVQ6 151 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 SLC25A26Q70HW3 274 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 TCF23Q7RTU1 214 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 LHFPL4Q7Z7J7 247 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 DYNAPQ8N1N2 210 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 ASCC1Q8N9N2 400 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 OR4C13Q8NGP0 309 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 OR13C5Q8NGS8 318 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 TRMT10AQ8TBZ6 339 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 TRUB1Q8WWH5 349 aaKnown RBP6.32□□□□□ -1.4
MRPS35-204ENST00000542199 PP6455Q8WZ26 134 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 GGHQ92820 318 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 LINC00479Q96M42 142 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 CDCA4Q9BXL8 241 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 RIBC2Q9H4K1 309 aa6.32□□□□□ -1.4
MRPS35-204ENST00000542199 IGKV1-9A0A0C4DH69 117 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 TRBV2A0A0J9YWF9 115 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 H3BSH0 61 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 K7EQD1 137 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 SERPINA3P01011 423 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 ISG15P05161 165 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 ZNF728P0DKX0 622 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 PIPP12273 146 aaPredicted RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 GPR183P32249 361 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 LUMP51884 338 aaPredicted RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 SNRPGP62308 76 aaKnown RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 MEF2CQ06413 473 aaPredicted RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 HERPUD1Q15011 391 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 ZNF146Q15072 292 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 MOGAT2Q3SYC2 334 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 UTS2BQ765I0 119 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 LRRTM1Q86UE6 522 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 LAX1Q8IWV1 398 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 Q8IYB0 196 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 RDH10Q8IZV5 341 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 Q8N2B8 174 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 OR11H6Q8NGC7 330 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 OR13D1Q8NGV5 346 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 OR2G2Q8NGZ5 317 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 RNASE8Q8TDE3 154 aaKnown RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 ADAT3Q96EY9 351 aaPredicted RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 BORCS8Q96FH0 119 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 MBOAT4Q96T53 435 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 RBFOX1Q9NWB1 397 aaKnown RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 GNG8Q9UK08 70 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 TBL2Q9Y4P3 447 aaKnown RBP6.31□□□□□ -1.4
MRPS35-204ENST00000542199 ETV7Q9Y603 341 aa6.31□□□□□ -1.4
MRPS35-204ENST00000542199 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
MRPS35-204ENST00000542199 C5orf51A6NDU8 294 aa6.3□□□□□ -1.4
MRPS35-204ENST00000542199 A6NDX4 124 aa6.3□□□□□ -1.4
MRPS35-204ENST00000542199 ENTPD6O75354 484 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms