RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-215	ENST00000542133	HTR1F	P30939	366 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	S100A7	P31151	101 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	CDX1	P47902	265 aa	Predicted RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	RAB5C	P51148	216 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	DAP3	P51398	398 aa	Known RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	ATP1B3	P54709	279 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	RPL11	P62913	178 aa	Known RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	DLK1	P80370	383 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	CAV1	Q03135	178 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	ROM1	Q03395	351 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	CDK5R2	Q13319	367 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	NSUN5P1	Q3KNT7	163 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	ZNF718	Q3SXZ3	478 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	SERTAD4-AS1	Q5TG53	156 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	UQCC3	Q6UW78	93 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	TEX261	Q6UWH6	196 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	LINC01551	Q86U37	167 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	SLC30A8	Q8IWU4	369 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	PDZD9	Q8IXQ8	264 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	ZNF440	Q8IYI8	595 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	KRTCAP2	Q8N6L1	136 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	KLHDC1	Q8N7A1	406 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	TMEM217	Q8N7C4	229 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	PNLDC1	Q8NA58	520 aa	Known RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	OR1L6	Q8NGR2	347 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	OR1J2	Q8NGS2	313 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	OR6N1	Q8NGY5	312 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	OR1P1	Q8NH06	330 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	SLC25A40	Q8TBP6	338 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	KLF14	Q8TD94	323 aa	Predicted RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	C10orf82	Q8WW14	230 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	HPSE2	Q8WWQ2	592 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	ITCH	Q96J02	903 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	URM1	Q9BTM9	101 aa	Known RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	FUNDC2	Q9BWH2	189 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	QTRT1	Q9BXR0	403 aa	Known RBP	6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133		Q9H521	79 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	TMEM38B	Q9NVV0	291 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	LGALS13	Q9UHV8	139 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	CSMD3	Q7Z407	3707 aa		6.28	□□□□□ -1.4
NPIPB4-215	ENST00000542133	CDHR4	A6H8M9	788 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133		A8MWP6	167 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ENSA	O43768	121 aa	Known RBP	6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ORC5	O43913	435 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PTH	P01270	115 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	LINC00032	P0C843	101 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ALOX5AP	P20292	161 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	DUSP1	P28562	367 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	EPHA3	P29320	983 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR3A1	P47881	315 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	TCTA	P57738	103 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	KRTAP10-11	P60412	298 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GNG3	P63215	75 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ID3	Q02535	119 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FHL3	Q13643	280 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	MS4A18	Q3C1V0	323 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR2W3	Q7Z3T1	314 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CROCCP2	Q86T23	111 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FGFRL1	Q8N441	504 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	NOXO1	Q8NFA2	376 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR4F17	Q8NGA8	305 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR5AU1	Q8NGC0	362 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR8B3	Q8NGG8	313 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR5R1	Q8NH85	324 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR2AE1	Q8NHA4	323 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ASB13	Q8WXK3	278 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RPE	Q96AT9	228 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FLYWCH2	Q96CP2	140 aa	Known RBP	6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FAM46A	Q96IP4	442 aa	Known RBP	6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNF582	Q96NG8	517 aa	Predicted RBP	6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR4F4	Q96R69	305 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR8B2	Q96RD0	313 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CDCA4	Q9BXL8	241 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	DPY30	Q9C005	99 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	OR2J1	Q9GZK6	312 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	CHST5	Q9GZS9	411 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RNF121	Q9H920	327 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SLCO1B3	Q9NPD5	702 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNRD1	Q9P1U0	126 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RCC2	Q9P258	522 aa	Known RBP	6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	FIS1	Q9Y3D6	152 aa		6.27	□□□□□ -1.41
NPIPB4-215	ENST00000542133	PLEC	Q15149	4684 aa	Known RBP	6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133		A0A087WUJ7	227 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	IQCM	A0A1B0GVH7	501 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	NPIPB5	A8MRT5	1133 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNF878	C9JN71	531 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133		G3V2L1	256 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HMGN4	O00479	90 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	SLC16A7	O60669	478 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	ZNF205	O95201	554 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	HAND1	O96004	215 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	IFNA7	P01567	189 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	DBI	P07108	87 aa	Known RBP	6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	MMP7	P09237	267 aa	Predicted RBP	6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	DUX4L4	P0CJ87	422 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GP9	P14770	177 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	KITLG	P21583	273 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	GCSH	P23434	173 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	APLNR	P35414	380 aa		6.26	□□□□□ -1.41
NPIPB4-215	ENST00000542133	RORC	P51449	518 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms