RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 C22orf15Q8WYQ4 148 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 LHX4Q969G2 390 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 CREB3L1Q96BA8 519 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 FGGYQ96C11 551 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 PELI1Q96FA3 418 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 SDSLQ96GA7 329 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ST6GAL2Q96JF0 529 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 GAFA1Q96PS6 74 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 DCTN5Q9BTE1 182 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 CCDC90BQ9GZT6 254 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 FGF23Q9GZV9 251 aaPredicted RBP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 WDR13Q9H1Z4 485 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 RHOFQ9HBH0 211 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ACOT13Q9NPJ3 140 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ONECUT1Q9UBC0 465 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 NIPBLQ6KC79 2804 aaeCLIP4.37□□□□□ -1.71
CPSF7-220ENST00000541963 ARHGAP32A7KAX9 2087 aa4.37□□□□□ -1.71
CPSF7-220ENST00000541963 NAV3Q8IVL0 2385 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 IGKV1D-17A0A075B6S4 117 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 IGHV3OR16-10A0A075B7F0 116 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 IGHV1-69DA0A0B4J2H0 117 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CENPVL3A0A0U1RRI6 287 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 OR4C45A6NMZ5 311 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CLDN34H7C241 214 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 M0R1W7 72 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 SYNGR1O43759 233 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 WBP4O75554 376 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 IGHV1-69P01742 117 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 MT-ND2P03891 347 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CRYBA1P05813 215 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 HCKP08631 526 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 IGHV4-38-2P0DP08 117 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 PRTN3P24158 256 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 MYL9P24844 172 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 RCVRNP35243 200 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 KIR3DL2P43630 455 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 UBA52P62987 128 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 DMRTC1Q5HYR2 192 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CLLU1Q5K131 121 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 SLC25A26Q70HW3 274 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 GDPD3Q7L5L3 318 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 VMO1Q7Z5L0 202 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CALHM1Q8IU99 346 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 TMEM86BQ8N661 226 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 THAP8Q8NA92 274 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 ZNRF1Q8ND25 227 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 GPR148Q8TDV2 347 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 TSEN15Q8WW01 171 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 APH1BQ8WW43 257 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 EMG1Q92979 244 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 SEH1LQ96EE3 360 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 ADAT3Q96EY9 351 aaPredicted RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 OPALINQ96PE5 141 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 NRIP2Q9BQI9 281 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 URM1Q9BTM9 101 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 SIRPDQ9H106 197 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 METTL8Q9H825 291 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 HEXA-AS1Q9H8Q6 139 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 ISG20L2Q9H9L3 353 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 HES4Q9HCC6 221 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 BABAM2Q9NXR7 383 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 CNOT2Q9NZN8 540 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 COPZ2Q9P299 210 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 KIF25Q9UIL4 384 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 DIMT1Q9UNQ2 313 aaKnown RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 MAB21L2Q9Y586 359 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 MTORP42345 2549 aa4.36□□□□□ -1.71
CPSF7-220ENST00000541963 SETD2Q9BYW2 2564 aaPredicted RBP4.36□□□□□ -1.71
CPSF7-220ENST00000541963 ZANQ9Y493 2812 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 TMEM89A2RUT3 159 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 BTBD17A6NE02 478 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 K7N7A8 449 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 TOR1AO14656 332 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SH2D1BO14796 132 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 CLIC3O95833 236 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 PAHP00439 452 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 HLA-DQB1P01920 261 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SFTPBP07988 381 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 FBP1P09467 338 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 LIMS3P0CW19 117 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 LIMS4P0CW20 117 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 PIPP12273 146 aaPredicted RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ZP3P21754 424 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 POU3F4P49335 361 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 RORCP51449 518 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 UBE2E1P51965 193 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 RAG2P55895 527 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 TAS2R43P59537 309 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ERVK11-1P61568 191 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 RPL31P62899 125 aaKnown RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 PPP3R1P63098 170 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 RPL36AP83881 106 aaKnown RBP4.35□□□□□ -1.71
CPSF7-220ENST00000541963 CD300CQ08708 224 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 ST3GAL4Q11206 333 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 PDZK1IP1Q13113 114 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 GRK1Q15835 563 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 DEFB112Q30KQ8 113 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 SPIN3Q5JUX0 258 aa4.35□□□□□ -1.71
CPSF7-220ENST00000541963 RNLSQ5VYX0 342 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 281.7 ms