RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 TSC22D2O75157 780 aa20.22■□□□□ 0.83
TTC3-225ENST00000540756 PROP1O75360 226 aa20.22■□□□□ 0.83
TTC3-225ENST00000540756 EIF4EBP1Q13541 118 aaPredicted RBP20.22■□□□□ 0.83
TTC3-225ENST00000540756 C11orf87Q6NUJ2 197 aa20.22■□□□□ 0.83
TTC3-225ENST00000540756 ZNF695Q8IW36 515 aa20.22■□□□□ 0.83
TTC3-225ENST00000540756 ARHGAP32A7KAX9 2087 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 H0YIZ8 118 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 IFNA21P01568 189 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 PSMB6P28072 239 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 S100GP29377 79 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 ZNF841Q6ZN19 808 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 C1orf229Q6ZS94 237 aaPredicted RBP20.21■□□□□ 0.83
TTC3-225ENST00000540756 ZBTB8BQ8NAP8 495 aaPredicted RBP20.21■□□□□ 0.83
TTC3-225ENST00000540756 LINC00574Q9H8X3 128 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 IDI2-AS1Q9NZ38 188 aa20.21■□□□□ 0.83
TTC3-225ENST00000540756 RAB32Q13637 225 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 Q3ZCU0 254 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 OR2B11Q5JQS5 317 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 RNF126Q9BV68 326 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 ZNRD1Q9P1U0 126 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 MBD2Q9UBB5 411 aa20.2■□□□□ 0.83
TTC3-225ENST00000540756 SPG11Q96JI7 2443 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 MEF2CQ06413 473 aaPredicted RBP20.2■□□□□ 0.82
TTC3-225ENST00000540756 ZNF585BQ52M93 769 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 CT45A1Q5HYN5 189 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 FOXRED2Q8IWF2 684 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 OR52M1Q8NGK5 317 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 CT45A3Q8NHU0 189 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 IFI27L2Q9H2X8 130 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 NARFLQ9H6Q4 476 aa20.2■□□□□ 0.82
TTC3-225ENST00000540756 KLF2Q9Y5W3 355 aaPredicted RBP20.2■□□□□ 0.82
TTC3-225ENST00000540756 CSMD2Q7Z408 3487 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 IGKV1-39P01597 117 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 IGKV1D-39P04432 117 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 CYCSP99999 105 aaKnown RBP20.19■□□□□ 0.82
TTC3-225ENST00000540756 FGL1Q08830 312 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 ZNF546Q86UE3 836 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 EDARADDQ8WWZ3 215 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 HMSDA8MTL9 139 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 RAMP3O60896 148 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 GNG10P50151 68 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 AP2S1P53680 142 aaPredicted RBP20.19■□□□□ 0.82
TTC3-225ENST00000540756 BRWD1-AS2P59051 145 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 MRPS11P82912 194 aaKnown RBP20.19■□□□□ 0.82
TTC3-225ENST00000540756 RPL39P5Q59GN2 51 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 ZNF714Q96N38 554 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 PLEKHF2Q9H8W4 249 aa20.19■□□□□ 0.82
TTC3-225ENST00000540756 A1L4Q6 167 aa20.18■□□□□ 0.82
TTC3-225ENST00000540756 LINC00473A8K010 186 aa20.18■□□□□ 0.82
TTC3-225ENST00000540756 RBPMSQ93062 196 aaKnown RBP20.18■□□□□ 0.82
TTC3-225ENST00000540756 TAS2R3Q9NYW6 316 aa20.18■□□□□ 0.82
TTC3-225ENST00000540756 OR5AC2Q9NZP5 309 aa20.18■□□□□ 0.82
TTC3-225ENST00000540756 A0A0G2JRQ6 117 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 FSTL3O95633 263 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 SERPINE2P07093 398 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 GPR12P47775 334 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 S100A10P60903 97 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 SRPXP78539 464 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 IZUMO4Q1ZYL8 232 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 CHODLQ9H9P2 273 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 RPUSD1Q9UJJ7 312 aaKnown RBP20.17■□□□□ 0.82
TTC3-225ENST00000540756 SLC25A4P12235 298 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 ZBTB34Q8NCN2 500 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 ZNF439Q8NDP4 499 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 RBMXL1Q96E39 390 aaKnown RBP20.17■□□□□ 0.82
TTC3-225ENST00000540756 ABHD14AQ9BUJ0 271 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 TMED3Q9Y3Q3 217 aa20.17■□□□□ 0.82
TTC3-225ENST00000540756 L7N2F9 121 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 CLDN1O95832 211 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 SCGB1D2O95969 90 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 F12P00748 615 aaPredicted RBP20.16■□□□□ 0.82
TTC3-225ENST00000540756 WNT2P09544 360 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 THAP6Q8TBB0 222 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 RAB1CQ92928 201 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 SPOCK3Q9BQ16 436 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 MFFQ9GZY8 342 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 GAL3ST2Q9H3Q3 398 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 HEXA-AS1Q9H8Q6 139 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 CENPEQ02224 2701 aa20.16■□□□□ 0.82
TTC3-225ENST00000540756 C17orf98A8MV24 154 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 DLX6P56179 175 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 LIN7CQ9NUP9 197 aaKnown RBP20.15■□□□□ 0.82
TTC3-225ENST00000540756 TNFSF18Q9UNG2 199 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 MED13LQ71F56 2210 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 CELSR2Q9HCU4 2923 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 RPA2P15927 270 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 DLX1P56177 255 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 NMSQ5H8A3 153 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 ODF3L1Q8IXM7 274 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 TCTEX1D2Q8WW35 142 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 RRNAD1Q96FB5 475 aaKnown RBP20.15■□□□□ 0.82
TTC3-225ENST00000540756 TIMD4Q96H15 378 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 RAB9BQ9NP90 201 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 SVEP1Q4LDE5 3571 aa20.15■□□□□ 0.82
TTC3-225ENST00000540756 OVOL3O00110 214 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 MBPP02686 304 aaPredicted RBP20.14■□□□□ 0.81
TTC3-225ENST00000540756 TMEM155Q4W5P6 130 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 TMEM65Q6PI78 240 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 HEPN1Q6WQI6 88 aa20.14■□□□□ 0.81
TTC3-225ENST00000540756 RNF222A6NCQ9 220 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms