RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 LIN54Q6MZP7 749 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 IZUMO2Q6UXV1 221 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 RNF152Q8N8N0 203 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-208ENST00000540683 OR5M8Q8NGP6 311 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 FAM3DQ96BQ1 224 aa8.2□□□□□ -1.1
CDCA3-208ENST00000540683 TSNAXQ99598 290 aaKnown RBP8.2□□□□□ -1.1
CDCA3-208ENST00000540683 YTHDF1Q9BYJ9 559 aaKnown RBP8.2□□□□□ -1.1
CDCA3-208ENST00000540683 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 DENRO43583 198 aaKnown RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 SPDEFO95238 335 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 APOA2P02652 100 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 GSTP1P09211 210 aaKnown RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 IGLL1P15814 213 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 INSL3P51460 131 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF134P52741 427 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 ACTBP60709 375 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 HLA-DRB3P79483 266 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 UNC119Q13432 240 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 SSX1Q16384 188 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 FAM27D1Q5T7N8 215 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 FOXB2Q5VYV0 432 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF660Q6AZW8 331 aaPredicted RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF880Q6PDB4 577 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 LINC00482Q8N8I6 264 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 NPBQ8NG41 125 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 OR52L2PQ8NGH6 319 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 OR4A4PQ8NGN8 299 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 PTX4Q96A99 478 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 CNBD2Q96M20 576 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 NOL4LQ96MY1 436 aaPredicted RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 CMSS1Q9BQ75 279 aaKnown RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 PLSCR3Q9NRY6 295 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 ZNF581Q9P0T4 197 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 NKX1-2Q9UD57 310 aaPredicted RBP8.19□□□□□ -1.1
CDCA3-208ENST00000540683 WASHC3Q9Y3C0 194 aa8.19□□□□□ -1.1
CDCA3-208ENST00000540683 SAA2-SAA4A0A096LPE2 208 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-208ENST00000540683 ANKRD65E5RJM6 399 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 H7C2Y5 167 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 CCL24O00175 119 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 SLC31A2O15432 143 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 OR8U8P0C7N1 319 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 SAA2P0DJI9 122 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-208ENST00000540683 RAB6AP20340 208 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 TALDO1P37837 337 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 CEACAM6P40199 344 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 VHLP40337 213 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 VEGFCP49767 419 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 QRFPP83859 136 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 C5orf64Q2M2E5 130 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 UTF1Q5T230 341 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 C9orf66Q5T8R8 295 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 OR10K2Q6IF99 312 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 MRPL41Q8IXM3 137 aaKnown RBP8.18□□□□□ -1.1
CDCA3-208ENST00000540683 OR10J5Q8NHC4 309 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 C4orf3Q8WVX3 66 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 RAB3CQ96E17 227 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 KCTD7Q96MP8 289 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 NABP2Q9BQ15 211 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 LPAR5Q9H1C0 372 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 OR51J1Q9H342 316 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 AURKAIP1Q9NWT8 199 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-208ENST00000540683 NDUFB11Q9NX14 153 aa8.18□□□□□ -1.1
CDCA3-208ENST00000540683 AK6Q9Y3D8 172 aaKnown RBP8.18□□□□□ -1.1
CDCA3-208ENST00000540683 CMYA5Q8N3K9 4069 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TRAV41A0A0B4J266 112 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TRDV1A0A1B0GX56 115 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 IFITM5A6NNB3 132 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TRDCB7Z8K6 153 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TMEM127O75204 238 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 RRASP10301 218 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 RAB3BP20337 219 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 F2RL1P55085 397 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 RPS25P62851 125 aaKnown RBP8.17□□□□□ -1.1
CDCA3-208ENST00000540683 PITPNAQ00169 270 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 EGFEM1PQ0D2K5 195 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 INSL4Q14641 139 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 SRSF7Q16629 238 aaKnown RBP eCLIP8.17□□□□□ -1.1
CDCA3-208ENST00000540683 C2orf76Q3KRA6 126 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TMEM91Q6ZNR0 172 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 C8orf86Q6ZUL3 223 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 TPRA1Q86W33 373 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 PDPNQ86YL7 162 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 NRG4Q8WWG1 115 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 MRPL20Q9BYC9 149 aaKnown RBP8.17□□□□□ -1.1
CDCA3-208ENST00000540683 IFI27L2Q9H2X8 130 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 Q9N2K0 584 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 AK3Q9UIJ7 227 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 VSIG4Q9Y279 399 aa8.17□□□□□ -1.1
CDCA3-208ENST00000540683 RRHO14718 337 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 SOCS1O15524 211 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 CREBL2O60519 120 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-208ENST00000540683 SLC22A5O76082 557 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 NDUFA3O95167 84 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 TFAP2AP05549 437 aa8.16□□□□□ -1.1
CDCA3-208ENST00000540683 CTXN2P0C2S0 81 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms