RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 KIR3DL3Q8N743 410 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 CASTOR1Q8WTX7 329 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 DMRTB1Q96MA1 342 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 IFI27L2Q9H2X8 130 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 NAA60Q9H7X0 242 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 LPAR2Q9HBW0 351 aa13.23□□□□□ -0.29
TRAF3-204ENST00000539721 MPPED1O15442 326 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 SUPT4H1P63272 117 aaKnown RBP13.22□□□□□ -0.29
TRAF3-204ENST00000539721 PAX2Q02962 417 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 SLC25A48Q6ZT89 311 aaKnown RBP13.22□□□□□ -0.29
TRAF3-204ENST00000539721 ZBTB34Q8NCN2 500 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 MED28Q9H204 178 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 A0A087X0M5 115 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 A0A1B0GX30 115 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 PGLYRP1O75594 196 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-204ENST00000539721 RRAS2P62070 204 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-204ENST00000539721 MSMO1Q15800 293 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 PRSS57Q6UWY2 283 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 ABHD12Q8N2K0 398 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 Q8N7P7 452 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 GPHA2Q96T91 129 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 MMP26Q9NRE1 261 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 KCNIP3Q9Y2W7 256 aa13.22□□□□□ -0.29
TRAF3-204ENST00000539721 POLR3KQ9Y2Y1 108 aaPredicted RBP13.22□□□□□ -0.29
TRAF3-204ENST00000539721 CSMD2Q7Z408 3487 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 NAV2Q8IVL1 2488 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 IFNA2P01563 188 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 ANXA3P12429 323 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 DLX1P56177 255 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 BTNL3Q6UXE8 466 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 LYG1Q8N1E2 194 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 C12orf45Q8N5I9 185 aaPredicted RBP13.21□□□□□ -0.29
TRAF3-204ENST00000539721 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 OR9G1Q8NH87 305 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 C5orf30Q96GV9 206 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 METTL8Q9H825 291 aaKnown RBP13.21□□□□□ -0.29
TRAF3-204ENST00000539721 KPTNQ9Y664 436 aa13.21□□□□□ -0.29
TRAF3-204ENST00000539721 A0A096LNT2 108 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 C3orf85A0A1B0GTC6 90 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 HMX3A6NHT5 357 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 J3QR06 171 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 DUS4LO95620 317 aaKnown RBP13.2□□□□□ -0.3
TRAF3-204ENST00000539721 OR5AC1P0C628 307 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 CD34P28906 385 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 DVL1P1P54792 670 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-204ENST00000539721 PRB3Q04118 309 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-204ENST00000539721 C8orf31Q8N9H6 132 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 GALNT14Q96FL9 552 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 Q96MF0 132 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 PHB2Q99623 299 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 SIRT7Q9NRC8 400 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 PIPOXQ9P0Z9 390 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 ZNRD1Q9P1U0 126 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 IGHV2-26A0A0B4J1V2 119 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 TOR1AO14656 332 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 RAB29O14966 203 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 COX7A1P24310 79 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 SP6Q3SY56 376 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 RPL39P5Q59GN2 51 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 LIN54Q6MZP7 749 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 C1orf122Q6ZSJ8 110 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 KRTAP1-3Q8IUG1 177 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 LINC00311Q8N616 119 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.2□□□□□ -0.3
TRAF3-204ENST00000539721 OR13D1Q8NGV5 346 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 OR51H1Q8NH63 302 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 COQ8AQ8NI60 647 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 MITD1Q8WV92 249 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 CLEC7AQ9BXN2 247 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 GAB2Q9UQC2 676 aa13.2□□□□□ -0.3
TRAF3-204ENST00000539721 SAA2-SAA4A0A096LPE2 208 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 RNF223E7ERA6 249 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 SAA2P0DJI9 122 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-204ENST00000539721 ZNF16P17020 682 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-204ENST00000539721 PRTN3P24158 256 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 F2RP25116 425 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 PRRX1P54821 245 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 LOXL1Q08397 574 aaPredicted RBP13.19□□□□□ -0.3
TRAF3-204ENST00000539721 FCN2Q15485 313 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 KCTD9Q7L273 389 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 VMO1Q7Z5L0 202 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 PNKDQ8N490 385 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 OR10X1Q8NGY0 326 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 ZNF596Q8TC21 504 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 CHAC2Q8WUX2 184 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 REG4Q9BYZ8 158 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 SIRPDQ9H106 197 aa13.19□□□□□ -0.3
TRAF3-204ENST00000539721 M0R1X1 148 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 PFDN1O60925 122 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 TRAPPC2P0DI81 140 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 TRAPPC2BP0DI82 140 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 CATR1Q13166 79 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 TMEM187Q14656 261 aa13.18□□□□□ -0.3
TRAF3-204ENST00000539721 ANKRD55Q3KP44 614 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms