RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 CEACAM6P40199 344 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 GALR1P47211 349 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 RPL23P62829 140 aaKnown RBP11.2□□□□□ -0.62
UBE3B-209ENST00000539584 LCN2P80188 198 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 MRPL49Q13405 166 aaKnown RBP11.2□□□□□ -0.62
UBE3B-209ENST00000539584 SSX9Q7RTT3 188 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 C16orf82Q7Z2V1 217 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 ZNF488Q96MN9 340 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 FSCN3Q9NQT6 498 aa11.2□□□□□ -0.62
UBE3B-209ENST00000539584 UBE2L5PA0A1B0GUS4 154 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 ZNF503-AS2A6NEH8 195 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 C17orf112F2Z3M2 114 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 P0C879 139 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 RD3LP0DJH9 198 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 IZUMO4Q1ZYL8 232 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 VWC2Q2TAL6 325 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 PDZD11Q5EBL8 140 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 C9orf135Q5VTT2 229 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 NUFIP2Q7Z417 695 aaKnown RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 MCEMP1Q8IX19 187 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 CISD2Q8N5K1 135 aaKnown RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 WDR31Q8NA23 367 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 OR10P1Q8NGE3 313 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 TMEM170AQ8WVE7 144 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 RAB24Q969Q5 203 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 GP6Q9HCN6 339 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 A0A087X0M5 115 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 A0A1B0GX30 115 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 LRRC30A6NM36 301 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 GGCTO75223 188 aaKnown RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 NEURL1O76050 574 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 ZNF16P17020 682 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 WNT5AP41221 380 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 ELLP55199 621 aaPredicted RBP11.19□□□□□ -0.62
UBE3B-209ENST00000539584 SRYQ05066 204 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 ABHD17BQ5VST6 288 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 SPINK14Q6IE38 97 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 CDPF1Q6NVV7 123 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 KCNIP4Q6PIL6 250 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 C17orf78Q8N4C9 275 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 ZNF709Q8N972 641 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 OR10G9Q8NGN4 311 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 OR10G7Q8NGN6 311 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 IMMP2LQ96T52 175 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 SSX3Q99909 188 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 TXNDC17Q9BRA2 123 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 PARLQ9H300 379 aa11.19□□□□□ -0.62
UBE3B-209ENST00000539584 TMEM210A6NLX4 147 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 ATXN7O15265 892 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-209ENST00000539584 RHBDL1O75783 438 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 RAC2P15153 192 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 CA6P23280 308 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 CCKARP32238 428 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 GABRA6Q16445 453 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 TBC1D28Q2M2D7 210 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 UBALD2Q8IYN6 164 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 BEND2Q8NDZ0 799 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 HLA-CQ95604 372 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 GALMQ96C23 342 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 DIRC2Q96SL1 478 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 CEP290O15078 2479 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 NCKAP5O14513 1909 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 TMEM30CPA0ZSE6 113 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 RAB29O14966 203 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 PDE6DO43924 150 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 SELEP16581 610 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 GNB2P62879 340 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 IGFBP7Q16270 282 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 OR8G2PQ6IF36 304 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 OR1K1Q8NGR3 316 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 RAB1CQ92928 201 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 NEIL1Q96FI4 390 aaPredicted RBP11.18□□□□□ -0.62
UBE3B-209ENST00000539584 THOC3Q96J01 351 aaKnown RBP11.18□□□□□ -0.62
UBE3B-209ENST00000539584 CHODLQ9H9P2 273 aa11.18□□□□□ -0.62
UBE3B-209ENST00000539584 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 CLDN14O95500 239 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 IGKV1D-33P01593 117 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 IGKV1-33P01594 117 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 AMBPP02760 352 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 GZMBP10144 247 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 ACP1P24666 158 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 FOXG1P55316 489 aaPredicted RBP11.17□□□□□ -0.62
UBE3B-209ENST00000539584 COL10A1Q03692 680 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 ACSM6Q6P461 480 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 SCCPDHQ8NBX0 429 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 DDA1Q9BW61 102 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 TTTY12Q9BZ98 90 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 GAB2Q9UQC2 676 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 SDK2Q58EX2 2172 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 PI4KAP42356 2102 aa11.17□□□□□ -0.62
UBE3B-209ENST00000539584 A0A1W2PR80 420 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 OOEPA6NGQ2 149 aa11.16□□□□□ -0.62
UBE3B-209ENST00000539584 ARGFXA6NJG6 315 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms