RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 ZNF816Q0VGE8 651 aaPredicted RBP10.07□□□□□ -0.8
CPNE8-203ENST00000538596 C1QL4Q86Z23 238 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 TPRX1Q8N7U7 411 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 TCTEX1D2Q8WW35 142 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 NANOS1Q8WY41 292 aaKnown RBP10.07□□□□□ -0.8
CPNE8-203ENST00000538596 MIOXQ9UGB7 285 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 FZR1Q9UM11 496 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 CDX4O14627 284 aaPredicted RBP10.07□□□□□ -0.8
CPNE8-203ENST00000538596 AGFG2O95081 481 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 BCL2P10415 239 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 AESQ08117 197 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 BTNL3Q6UXE8 466 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 DPPA3Q6W0C5 159 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 SSX3Q99909 188 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 OR2D2Q9H210 308 aa10.07□□□□□ -0.8
CPNE8-203ENST00000538596 MBNL3Q9NUK0 354 aaKnown RBP10.07□□□□□ -0.8
CPNE8-203ENST00000538596 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
CPNE8-203ENST00000538596 A0A087WWC5 75 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 SH2D1BO14796 132 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 CLDN1O95832 211 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 HAND1O96004 215 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 IGKV1D-33P01593 117 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 IGKV1-33P01594 117 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 ZNF883P0CG24 379 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 RD3LP0DJH9 198 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 CD46P15529 392 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
CPNE8-203ENST00000538596 GLIPR1P48060 266 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 ARG2P78540 354 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 SPNS3Q6ZMD2 512 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 Q6ZR03 302 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 CDH20Q9HBT6 801 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 DOK5Q9P104 306 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 TRAV1-1A0A0B4J248 108 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 TRGC2P03986 189 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 ZNF146Q15072 292 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 PDZD11Q5EBL8 140 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 ZNF766Q5HY98 468 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 GFI1BQ5VTD9 330 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 MOB1BQ7L9L4 216 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 WDR61Q9GZS3 305 aaKnown RBP10.06□□□□□ -0.8
CPNE8-203ENST00000538596 RBKSQ9H477 322 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 OBP2BQ9NPH6 170 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 CLN8Q9UBY8 286 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 POLDIP2Q9Y2S7 368 aa10.06□□□□□ -0.8
CPNE8-203ENST00000538596 CEBPZOSA8MTT3 80 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 C12orf77C9JDV5 145 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HOXB1P14653 301 aaPredicted RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 MDKP21741 143 aaPredicted RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 UBE2NP61088 152 aaKnown RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HES3Q5TGS1 186 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 CDPF1Q6NVV7 123 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 SLC35E3Q7Z769 313 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 CA5BP1Q8WTZ4 195 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 TMPRSS5Q9H3S3 457 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 UFSP2Q9NUQ7 469 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 TREM2Q9NZC2 230 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 WIPI2Q9Y4P8 454 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 MLNRO43193 412 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BKO60814 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BJP06899 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 DEFA4P12838 97 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BOP23527 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BBP33778 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BDP58876 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 BRWD1-AS2P59051 145 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BCP62807 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HBG1P69891 147 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HBG2P69892 147 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 SLC38A11Q08AI6 406 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST2H2BEQ16778 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 RPP25LQ8N5L8 163 aaKnown RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BHQ93079 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BNQ99877 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIST1H2BMQ99879 126 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 HIPK2Q9H2X6 1198 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 CISD1Q9NZ45 108 aaKnown RBP10.05□□□□□ -0.8
CPNE8-203ENST00000538596 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
CPNE8-203ENST00000538596 TRBV23-1A0A0A0MS06 115 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 IGHV3-43A0A0B4J1X8 118 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 MAP1LC3B2A6NCE7 125 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 IGHV3-43DP0DP04 118 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 HOXA5P20719 270 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 TNFRSF9Q07011 255 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 SRSF6Q13247 344 aaKnown RBP10.04□□□□□ -0.8
CPNE8-203ENST00000538596 C4orf17Q53FE4 359 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 PRAMEF6Q5VXH4 476 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 Q8IYB0 196 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 ZNF610Q8N9Z0 462 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 KLF14Q8TD94 323 aaPredicted RBP10.04□□□□□ -0.8
CPNE8-203ENST00000538596 MRGPRDQ8TDS7 321 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 MBD3L1Q8WWY6 194 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 TAF15Q92804 592 aaKnown RBP eCLIP10.04□□□□□ -0.8
CPNE8-203ENST00000538596 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
CPNE8-203ENST00000538596 MAP1LC3BQ9GZQ8 125 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms