RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 SAA2-SAA4A0A096LPE2 208 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 IGF1P05019 195 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 ELANEP08246 267 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 SAA2P0DJI9 122 aaPredicted RBP16.91■□□□□ 0.3
CCDC78-215ENST00000538176 RAB6AP20340 208 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 CEACAM6P40199 344 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 SERPINB10P48595 397 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 ACTBP60709 375 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 ARL6IP1Q15041 203 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 HES5Q5TA89 166 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 IFI27L2Q9H2X8 130 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 LINC00527Q9UJ94 153 aa16.91■□□□□ 0.3
CCDC78-215ENST00000538176 TMEM272A0A1B0GTI8 110 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 OR5H14A6NHG9 310 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 VDAC1P21796 283 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 FGF9P31371 208 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-215ENST00000538176 MYCNOSP40205 109 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 FOXE3Q13461 319 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 CXorf66Q5JRM2 361 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-215ENST00000538176 SPARTQ8N0X7 666 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 RAB3CQ96E17 227 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 RNF5Q99942 180 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 AGMATQ9BSE5 352 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 MCRIP2Q9BUT9 160 aaKnown RBP16.9■□□□□ 0.3
CCDC78-215ENST00000538176 MRPL20Q9BYC9 149 aaKnown RBP16.9■□□□□ 0.3
CCDC78-215ENST00000538176 KIAA1456Q9P272 454 aa16.9■□□□□ 0.3
CCDC78-215ENST00000538176 ZNF107Q9UII5 783 aaPredicted RBP16.9■□□□□ 0.3
CCDC78-215ENST00000538176 LINC01548A6NM66 108 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 TRDCB7Z8K6 153 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 NBR2O15453 112 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 DIRAS3O95661 229 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 CD3GP09693 182 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 OR3A3P47888 321 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 KIR2DS1Q14954 304 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 PLAC9Q5JTB6 97 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 C5orf24Q7Z6I8 188 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 TPRA1Q86W33 373 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 ZNF695Q8IW36 515 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 RNF152Q8N8N0 203 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 NPBQ8NG41 125 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 CYYR1Q96J86 154 aa16.89■□□□□ 0.29
CCDC78-215ENST00000538176 NUDT19A8MXV4 375 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 ST8SIA5O15466 376 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 RBBP9O75884 186 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 HLA-DRB1P01911 266 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 CDX1P47902 265 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-215ENST00000538176 THBS3P49746 956 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 LIN54Q6MZP7 749 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 Q6ZPA2 131 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 OR4A4PQ8NGN8 299 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 OR10R2Q8NGX6 335 aa16.88■□□□□ 0.29
CCDC78-215ENST00000538176 HDHD3Q9BSH5 251 aaPredicted RBP16.88■□□□□ 0.29
CCDC78-215ENST00000538176 IGHG4P01861 327 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 SCTP09683 121 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 IGLL1P15814 213 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 SRSF7Q16629 238 aaKnown RBP eCLIP16.87■□□□□ 0.29
CCDC78-215ENST00000538176 C22orf42Q6IC83 251 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 TOLLIPQ9H0E2 274 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 C11orf54Q9H0W9 315 aaPredicted RBP16.87■□□□□ 0.29
CCDC78-215ENST00000538176 ZMAT5Q9UDW3 170 aaKnown RBP16.87■□□□□ 0.29
CCDC78-215ENST00000538176 ZNF221Q9UK13 617 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 STUB1Q9UNE7 303 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 SSR3Q9UNL2 185 aa16.87■□□□□ 0.29
CCDC78-215ENST00000538176 NDUFA3O95167 84 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 CT45A6P0DMU7 189 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 CT45A5P0DMU8 189 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 CT45A7P0DMV0 189 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 PSMB9P28065 219 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 OR10A3P58181 314 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 C5orf64Q2M2E5 130 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 LINC00482Q8N8I6 264 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 KLHL30-AS1Q8NEE0 82 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 OR5AN1Q8NGI8 311 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 HSPB9Q9BQS6 159 aa16.86■□□□□ 0.29
CCDC78-215ENST00000538176 SHISA3A0PJX4 238 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 NOTOA8MTQ0 251 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 RAB27BO00194 218 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 SCGNO76038 276 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 GSTP1P09211 210 aaKnown RBP16.85■□□□□ 0.29
CCDC78-215ENST00000538176 SLC2A2P11168 524 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-215ENST00000538176 CFHR3Q02985 330 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 FOXB2Q5VYV0 432 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 MRPL41Q8IXM3 137 aaKnown RBP16.85■□□□□ 0.29
CCDC78-215ENST00000538176 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-215ENST00000538176 DPF1Q92782 380 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 ABHD14BQ96IU4 210 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 OR51J1Q9H342 316 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 TXNL4BQ9NX01 149 aaKnown RBP16.85■□□□□ 0.29
CCDC78-215ENST00000538176 GAB2Q9UQC2 676 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 KCNK7Q9Y2U2 307 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 WASHC3Q9Y3C0 194 aa16.85■□□□□ 0.29
CCDC78-215ENST00000538176 FABP7O15540 132 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 HIST1H1DP16402 221 aaKnown RBP16.84■□□□□ 0.29
CCDC78-215ENST00000538176 TALDO1P37837 337 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 RPL39P5Q59GN2 51 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 ZNF660Q6AZW8 331 aaPredicted RBP16.84■□□□□ 0.29
CCDC78-215ENST00000538176 ZNF773Q6PK81 442 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 C8orf86Q6ZUL3 223 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 OR8U1Q8NH10 309 aa16.84■□□□□ 0.29
CCDC78-215ENST00000538176 OR10J5Q8NHC4 309 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms