RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 RAB3CQ96E17 227 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 ABHD14AQ9BUJ0 271 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 ZFP57Q9NU63 452 aa11.76□□□□□ -0.53
LRRK1-211ENST00000538064 A0A0B4J203 849 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 FOXI3A8MTJ6 420 aaPredicted RBP11.75□□□□□ -0.53
LRRK1-211ENST00000538064 LANCL1O43813 399 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 SCGNO76038 276 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 TMEM50BP56557 158 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 MRPS15P82914 257 aaKnown RBP11.75□□□□□ -0.53
LRRK1-211ENST00000538064 HTD2P86397 168 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 LSAMPQ13449 338 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 MORN2Q502X0 79 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ANKRD13BQ86YJ7 626 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 OR10R2Q8NGX6 335 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ARHGAP5-AS1Q96IT6 56 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 S1PR3Q99500 378 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 PECRQ9BY49 303 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ATG5Q9H1Y0 275 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 OR2S2Q9NQN1 319 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ABRACLQ9P1F3 81 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 LINC00527Q9UJ94 153 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 MGAT4AQ9UM21 535 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ETV7Q9Y603 341 aa11.75□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF736B4DX44 427 aaPredicted RBP11.74□□□□□ -0.53
LRRK1-211ENST00000538064 TFAP2AP05549 437 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
LRRK1-211ENST00000538064 ALDH3B2P48448 385 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 SERPINB10P48595 397 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 THBS3P49746 956 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 PLA2G7Q13093 441 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 HMGN3Q15651 99 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 LY6G6FQ5SQ64 297 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 MOB1BQ7L9L4 216 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 MRPL41Q8IXM3 137 aaKnown RBP11.74□□□□□ -0.53
LRRK1-211ENST00000538064 KLHL30-AS1Q8NEE0 82 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 SETD6Q8TBK2 473 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 LGALS14Q8TCE9 139 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 RASL11BQ9BPW5 248 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 CMSS1Q9BQ75 279 aaKnown RBP11.74□□□□□ -0.53
LRRK1-211ENST00000538064 GON7Q9BXV9 100 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 GPR61Q9BZJ8 451 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 C12orf4Q9NQ89 552 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 AK3Q9UIJ7 227 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF580Q9UK33 172 aa11.74□□□□□ -0.53
LRRK1-211ENST00000538064 LINC01548A6NM66 108 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 RAB27BO00194 218 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 YPEL1O60688 119 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 RGS11O94810 467 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 GABARAPO95166 117 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 CD3GP09693 182 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 PPP1CCP36873 323 aaKnown RBP11.73□□□□□ -0.53
LRRK1-211ENST00000538064 RPS19P39019 145 aaKnown RBP11.73□□□□□ -0.53
LRRK1-211ENST00000538064 NCS1P62166 190 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 PLAC9Q5JTB6 97 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 GPR107Q5VW38 600 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 C18orf65Q6ZTR6 163 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 C8orf86Q6ZUL3 223 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 ODF3L1Q8IXM7 274 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 OR52L2PQ8NGH6 319 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 YPEL2Q96QA6 119 aa11.73□□□□□ -0.53
LRRK1-211ENST00000538064 TRBV6-6A0A0A6YYG2 114 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 NAPSAO96009 420 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 HIST1H1DP16402 221 aaKnown RBP11.72□□□□□ -0.53
LRRK1-211ENST00000538064 TGFBR1P36897 503 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 RPL5P46777 297 aaKnown RBP11.72□□□□□ -0.53
LRRK1-211ENST00000538064 VBP1P61758 197 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 CFHR3Q02985 330 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 MOGAT2Q3SYC2 334 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF880Q6PDB4 577 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF833PQ6ZTB9 187 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 RNF152Q8N8N0 203 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 SLC25A46Q96AG3 418 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 GALMQ96C23 342 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 P2RX4Q99571 388 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 HSPB9Q9BQS6 159 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 MRPL20Q9BYC9 149 aaKnown RBP11.72□□□□□ -0.53
LRRK1-211ENST00000538064 RHBDL2Q9NX52 303 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 SPATA2Q9UM82 520 aa11.72□□□□□ -0.53
LRRK1-211ENST00000538064 A0A075B6Q4 140 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 MFNGO00587 321 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 SOX6P35712 828 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 TALDO1P37837 337 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 MYCNOSP40205 109 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 F2RL1P55085 397 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 EGFEM1PQ0D2K5 195 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 FOXE3Q13461 319 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 MMDQ15546 238 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 PNLIPRP3Q17RR3 467 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 FAM71F2Q6NXP2 309 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 C5orf24Q7Z6I8 188 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 OR2AK2Q8NG84 335 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 DPF1Q92782 380 aa11.71□□□□□ -0.53
LRRK1-211ENST00000538064 KCTD12Q96CX2 325 aaKnown RBP11.71□□□□□ -0.53
LRRK1-211ENST00000538064 IFI27L2Q9H2X8 130 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms