RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ANKRD30BLA7E2S9 258 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 A8MWP6 167 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 GGCTO75223 188 aaKnown RBP10.29□□□□□ -0.76
CPSF7-218ENST00000537641 RNF224P0DH78 156 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 CCKARP32238 428 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 GFRA1P56159 465 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 GNG3P63215 75 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 TESK1Q15569 626 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 IZUMO4Q1ZYL8 232 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 ZNF585BQ52M93 769 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 ACTL10Q5JWF8 245 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 UNQ6494/PRO21346Q6UXR6 183 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 TIPARPQ7Z3E1 657 aaKnown RBP10.29□□□□□ -0.76
CPSF7-218ENST00000537641 CISD2Q8N5K1 135 aaKnown RBP10.29□□□□□ -0.76
CPSF7-218ENST00000537641 TMEM147Q9BVK8 224 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 PARLQ9H300 379 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 OR1A1Q9P1Q5 309 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 PCSK5Q92824 1860 aa10.29□□□□□ -0.76
CPSF7-218ENST00000537641 VENTXO95231 258 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 MDKP21741 143 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-218ENST00000537641 CCNOP22674 350 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 ARR3P36575 388 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 SSX2Q16385 188 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 SPANXN5Q5MJ07 72 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 RDH5Q92781 318 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 TMEM18Q96B42 140 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 ARRDC1-AS1Q9H2J1 176 aa10.28□□□□□ -0.76
CPSF7-218ENST00000537641 J3QT63 122 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 HS3ST1O14792 307 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 TRAPPC6AO75865 159 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 IGKV1D-33P01593 117 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 IGKV1-33P01594 117 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 GYPAP02724 150 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 RFPL3SP0C7P2 107 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 JMJD7P0C870 316 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 GDF1P27539 372 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 CYB561P49447 251 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 MSMO1Q15800 293 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 Q6P435 159 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 ACSM6Q6P461 480 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 KCNIP4Q6PIL6 250 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 ZNF66Q6ZN08 573 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 BEND4Q6ZU67 534 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.27□□□□□ -0.76
CPSF7-218ENST00000537641 C17orf78Q8N4C9 275 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.76
CPSF7-218ENST00000537641 ZBTB34Q8NCN2 500 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 POM121L2Q96KW2 1035 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 SPRY4Q9C004 299 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 ZNF552Q9H707 407 aaPredicted RBP10.27□□□□□ -0.76
CPSF7-218ENST00000537641 HSPB7Q9UBY9 170 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 KCNS2Q9ULS6 477 aa10.27□□□□□ -0.76
CPSF7-218ENST00000537641 FRYLO94915 3013 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 VPS13AQ96RL7 3174 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 CD55P08174 381 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 NDUFB7P17568 137 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 GZMHP20718 246 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 TUBG1P23258 451 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 SPCS3P61009 180 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 ERVS71-1P61550 626 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 TNFRSF9Q07011 255 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 ZNF497Q6ZNH5 498 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 ZNF664Q8N3J9 261 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 IL1F10Q8WWZ1 152 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 RPUSD4Q96CM3 377 aaKnown RBP10.27□□□□□ -0.77
CPSF7-218ENST00000537641 NEIL1Q96FI4 390 aaPredicted RBP10.27□□□□□ -0.77
CPSF7-218ENST00000537641 ZNF488Q96MN9 340 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 MRPL37Q9BZE1 423 aaKnown RBP10.27□□□□□ -0.77
CPSF7-218ENST00000537641 OR6C3Q9NZP0 311 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 PPP1R3CQ9UQK1 317 aa10.27□□□□□ -0.77
CPSF7-218ENST00000537641 CHD3Q12873 2000 aaKnown RBP10.27□□□□□ -0.77
CPSF7-218ENST00000537641 KMT2EQ8IZD2 1858 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 SYNGR4O95473 234 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 CLDN1O95832 211 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 IGHV3-9P01782 118 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 SP9P0CG40 484 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 SELLP14151 372 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 IDH3GP51553 393 aaPredicted RBP10.26□□□□□ -0.77
CPSF7-218ENST00000537641 NUBP1P53384 320 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 LCN2P80188 198 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 P2RY6Q15077 328 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 FAM180AQ6UWF9 173 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 Q8IYB0 196 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 NECAP1Q8NC96 275 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 OR10G9Q8NGN4 311 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 OR10G7Q8NGN6 311 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 OR2T10Q8NGZ9 312 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 PRRG4Q9BZD6 226 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 DEPPQ9NTK1 212 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 BOKQ9UMX3 212 aaPredicted RBP10.26□□□□□ -0.77
CPSF7-218ENST00000537641 WIPI2Q9Y4P8 454 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 RBM7Q9Y580 266 aaKnown RBP10.26□□□□□ -0.77
CPSF7-218ENST00000537641 WDFY3Q8IZQ1 3526 aa10.26□□□□□ -0.77
CPSF7-218ENST00000537641 A0A096LPE4 126 aa10.25□□□□□ -0.77
CPSF7-218ENST00000537641 A0A1W2PPZ6 126 aa10.25□□□□□ -0.77
CPSF7-218ENST00000537641 LNP1A1A4G5 178 aa10.25□□□□□ -0.77
CPSF7-218ENST00000537641 C9orf172C9J069 976 aa10.25□□□□□ -0.77
CPSF7-218ENST00000537641 P0C879 139 aa10.25□□□□□ -0.77
CPSF7-218ENST00000537641 CD99P14209 185 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms