RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 OR11H2Q8NH07 326 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 OR51E1Q8TCB6 317 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 NEUROG1Q92886 237 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 NUS1Q96E22 293 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 COMMD5Q9GZQ3 224 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 NPFFR1Q9GZQ6 430 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 K7ESM1 405 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 CGAP01215 116 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 FTH1P19P0C7X4 201 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 SRFP11831 508 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 LGALS4P56470 323 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 WDR5BQ86VZ2 330 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2K2Q8NGT1 345 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 TAF15Q92804 592 aaKnown RBP eCLIP7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 OR2A5Q96R48 311 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 THYN1Q9P016 225 aa7.28□□□□□ -1.24
SRGAP1-202ENST00000537556 PAPPA2Q9BXP8 1791 aa7.27□□□□□ -1.24
SRGAP1-202ENST00000537556 C9orf118A6NHY6 69 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 SERPINE2P07093 398 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 CELA3BP08861 270 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 NPY1RP25929 384 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 REG1BP48304 166 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 RPL24P83731 157 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 KISS1Q15726 138 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 RPEL1Q2QD12 228 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 HNRNPA1L2Q32P51 320 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 FAM19A2Q8N3H0 131 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF439Q8NDP4 499 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 OR8B3Q8NGG8 313 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 RCHY1Q96PM5 261 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 OR8B2Q96RD0 313 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 HDHD3Q9BSH5 251 aaPredicted RBP7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 QTRT1Q9BXR0 403 aaKnown RBP7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC25A22Q9H936 323 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 HS3ST3A1Q9Y663 406 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 CENPFP49454 3210 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 H0Y8G0 127 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 HSBP1O75506 76 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 NDUFB4O95168 129 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 TSPAN13O95857 204 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 CT62P0C5K7 136 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC35E2P0CK97 266 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 DRD1P21728 446 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 NPPCP23582 126 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 CRYBB3P26998 211 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 CA7P43166 264 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 OR1D5P58170 312 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 MGAT2Q10469 447 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 SGCBQ16585 318 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 LTC4SQ16873 150 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 DEFB134Q4QY38 66 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 DCAF12Q5T6F0 453 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 SOCS4Q8WXH5 440 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 TXNDC17Q9BRA2 123 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 KCNIP2Q9NS61 270 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 HCFC1R1Q9NWW0 138 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 KCNIP1Q9NZI2 227 aa7.27□□□□□ -1.25
SRGAP1-202ENST00000537556 PSMB11A5LHX3 300 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 TMEM189A5PLL7 270 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 A6NDN8 102 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 FAM181BA6NEQ2 426 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 KLRC4-KLRK1H3BQV0 150 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 HMGB3O15347 200 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 EOMESO95936 686 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 MT-ATP6P00846 226 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 NTSR1P30989 418 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 RPS15AP62244 130 aaKnown RBP7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 NOGQ13253 232 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 GABRA6Q16445 453 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 CCDC144NLQ6NUI1 221 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF788Q6ZQV5 615 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 TBC1D26Q86UD7 250 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ZNF721Q8TF20 911 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 GATAD1Q8WUU5 269 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ARL2-SNX15V9GYD0 113 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ALPK2Q86TB3 2170 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 H3BRM9 83 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 NXPH3O95157 252 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 CLEC3BP05452 202 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 COX5AP20674 150 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 SRIP30626 198 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 METAP1P53582 386 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 GNB1P62873 340 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 DPTQ07507 201 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 WDR74Q6RFH5 385 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 OR4C3Q8NH37 302 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 SSC4DQ8WTU2 575 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 APOBEC3DQ96AK3 386 aaPredicted RBP7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 LYRM4Q9HD34 91 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC7A10Q9NS82 523 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 KIAA1549LQ6ZVL6 1849 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 TRAV36DV7A0A075B6V5 113 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 A0A1W2PR80 420 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 OR4C46A6NHA9 309 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 M0R2Z0 102 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 ADH5P11766 374 aa7.26□□□□□ -1.25
SRGAP1-202ENST00000537556 SLC25A6P12236 298 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms