RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 RSG1Q9BU20 258 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 MRPL18Q9H0U6 180 aaKnown RBP9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 PLSCR4Q9NRQ2 329 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 HS3ST1O14792 307 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 NRTNQ99748 197 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 OR51B2Q9Y5P1 312 aa9.36□□□□□ -0.91
CLSTN3-207ENST00000537408 ERGP11308 486 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 THBS3P49746 956 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 SERF2P84101 59 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 SP5Q6BEB4 398 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 WBP2NLQ6ICG8 309 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 A0A0A6YYD4 124 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 G3V4G9 280 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 FCN1O00602 326 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 LMX1BO60663 402 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 GLI4P10075 376 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 CTSSP25774 331 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 YPEL3P61236 119 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 PSG3Q16557 428 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 KRTCAP3Q53RY4 240 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 RTN4RL2Q86UN3 420 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 MTURNQ8N3F0 131 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 KLHDC3Q9BQ90 382 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 PECRQ9BY49 303 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 PLEKHJ1Q9NW61 149 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 VDAC3Q9Y277 283 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 TDRD6O60522 2096 aaKnown RBP9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 NKX2-6A6NCS4 301 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 HCRTR1O43613 425 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 GPX1P07203 203 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 TMEM50BP56557 158 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 OR1N2Q8NGR9 330 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 LIPHQ8WWY8 451 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 PSMG3Q9BT73 122 aaPredicted RBP9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 MMP25Q9NPA2 562 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 PSG11Q9UQ72 335 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 CACNA1CQ13936 2221 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 NUP210LQ5VU65 1888 aa9.35□□□□□ -0.91
CLSTN3-207ENST00000537408 BLACEA4D250 179 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 S1PR2O95136 353 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 TTRP02766 147 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 HTD2P86397 168 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 Q0VG73 95 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 TSPO2Q5TGU0 170 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 TMEM178AQ8NBL3 297 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 WNT10AQ9GZT5 417 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 PRSS37A4D1T9 235 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 SLC33A1O00400 549 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 FAM57BQ71RH2 274 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 LRRC75AQ8NAA5 344 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 SPACA5Q96QH8 159 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 MRPL13Q9BYD1 178 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 AICDAQ9GZX7 198 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 MDC1Q14676 2089 aaKnown RBP9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 TRAV9-1A0A075B6T8 112 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 TRAV9-2A0A087WT02 112 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 LRP5LA4QPB2 252 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 OR2T8A6NH00 312 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 J3QR06 171 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 SAP30O75446 220 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 OR3A4PP47883 348 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 ZNF133P52736 654 aaPredicted RBP9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 CLDN15P56746 228 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 SGCBQ16585 318 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 LYPD6Q86Y78 171 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 BATF2Q8N1L9 274 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 KCNS1Q96KK3 526 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 LYRM4Q9HD34 91 aa9.34□□□□□ -0.91
CLSTN3-207ENST00000537408 C4orf51C9J302 202 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 P04436 131 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 ANOS1P23352 680 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 LGALS7P47929 136 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 HBG1P69891 147 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 HBG2P69892 147 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 TCF23Q7RTU1 214 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 UEVLDQ8IX04 471 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 C8orf44Q96CB5 159 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 ANXA10Q9UJ72 324 aa9.34□□□□□ -0.92
CLSTN3-207ENST00000537408 KIAA1324LA8MWY0 1029 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 BGLAPP02818 100 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 SLC35E2P0CK97 266 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 ZNF658BQ4V348 819 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 ADAT3Q96EY9 351 aaPredicted RBP9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 KLHL13Q9P2N7 655 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 SMPXQ9UHP9 88 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 C2orf16Q68DN1 1984 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 EML2O95834 649 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 ZAR1Q86SH2 424 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 NINJ1Q92982 152 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 WDR61Q9GZS3 305 aaKnown RBP9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 OCIAD1Q9NX40 245 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 PTPRSQ13332 1948 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 NCOR2Q9Y618 2525 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 PIGBOS1A0A0B4J2F0 54 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 SERINC4A6NH21 518 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 TAX1BP3O14907 124 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 PLA2G3Q9NZ20 509 aa9.33□□□□□ -0.92
CLSTN3-207ENST00000537408 TRBV9A0A0B4J1U6 114 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms