RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 HERVK_113P63121 156 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 TMEM267Q0VDI3 215 aaPredicted RBP2.55□□□□□ -2
PRKDC-208ENST00000536710 MED21Q13503 144 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 ACSBG2Q5FVE4 666 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 LCN8Q6JVE9 175 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 ZNF322Q6U7Q0 402 aaPredicted RBP2.55□□□□□ -2
PRKDC-208ENST00000536710 IQCF2Q8IXL9 164 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 OR10A6Q8NH74 314 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 CAPZA3Q96KX2 299 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 PACRGQ96M98 296 aaPredicted RBP2.55□□□□□ -2
PRKDC-208ENST00000536710 DHRS9Q9BPW9 319 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 RIMS2Q9UQ26 1411 aa2.55□□□□□ -2
PRKDC-208ENST00000536710 PRR14LQ5THK1 2151 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 NPATQ14207 1427 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 VPS37CA5D8V6 355 aaPredicted RBP2.54□□□□□ -2
PRKDC-208ENST00000536710 C3orf84H3BNL1 204 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 J3QRE1 110 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 SSNA1O43805 119 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 ESDP10768 282 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 SLC25A16P16260 332 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 GZMHP20718 246 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 ATP6V0CP27449 155 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 CD79BP40259 229 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 CDK9P50750 372 aaKnown RBP2.54□□□□□ -2
PRKDC-208ENST00000536710 BLVRAP53004 296 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 FAM229BQ4G0N7 80 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 HSP90B2PQ58FF3 399 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 FAM19A5Q7Z5A7 132 aaPredicted RBP2.54□□□□□ -2
PRKDC-208ENST00000536710 OR11H1Q8NG94 326 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 ASB13Q8WXK3 278 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 TBX5Q99593 518 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 CDCA4Q9BXL8 241 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 AICDAQ9GZX7 198 aa2.54□□□□□ -2
PRKDC-208ENST00000536710 CACNA1DQ01668 2161 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 TRAV8-1A0A0A6YYK1 113 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 PFDN6O15212 129 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 IGLV3-27P01718 113 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 OCM2P0CE71 109 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 COX5BP10606 129 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 Q8WTZ3 238 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 TMBIM1Q969X1 311 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 C20orf166-AS1Q96NR2 134 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 C1QTNF6Q9BXI9 259 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 DERL2Q9GZP9 239 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 TUBA4BQ9H853 241 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 SNX12Q9UMY4 172 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 HEY1Q9Y5J3 304 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 LTBP4Q8N2S1 1624 aa2.53□□□□□ -2
PRKDC-208ENST00000536710 CEP170Q5SW79 1584 aa2.53□□□□□ -2.01
PRKDC-208ENST00000536710 RB1CC1Q8TDY2 1594 aa2.53□□□□□ -2.01
PRKDC-208ENST00000536710 PTPRJQ12913 1337 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 TEX50A0A1B0GTY4 177 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 ZNF878C9JN71 531 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 LY6HO94772 140 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 DEXIO95424 95 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 SOD1P00441 154 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 APOEP02649 317 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 TYMSP04818 313 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 IL6P05231 212 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 IGHV3-30-3P0DP02 117 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 OPRM1P35372 400 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 CA7P43166 264 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 FGF12P61328 243 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 ZNF117Q03924 483 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 GNA13Q14344 377 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 TMEM31Q5JXX7 168 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 CST9Q5W186 159 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 RASL11AQ6T310 242 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 TCF24Q7RTU0 167 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 MND1Q9BWT6 205 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 GNB1LQ9BYB4 327 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 SMDT1Q9H4I9 107 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 USE1Q9NZ43 259 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 NUP205Q92621 2012 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 ZSWIM8A7E2V4 1837 aa2.52□□□□□ -2.01
PRKDC-208ENST00000536710 SDK2Q58EX2 2172 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 A0A1W2PP64 1363 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 GSTZ1O43708 216 aaPredicted RBP2.51□□□□□ -2.01
PRKDC-208ENST00000536710 CD7P09564 240 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 CD36P16671 472 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 OR10J1P30954 320 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 CD200P41217 278 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 CDC34P49427 236 aaPredicted RBP2.51□□□□□ -2.01
PRKDC-208ENST00000536710 DAPP51397 102 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 RWDD2BP57060 319 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 TSPEAR-AS2P59090 65 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 TAS2R45P59539 299 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 NAA40Q86UY6 237 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 BAP18Q8IXM2 172 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 FGFR1OP2Q9NVK5 253 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 HHLA2Q9UM44 414 aa2.51□□□□□ -2.01
PRKDC-208ENST00000536710 BRD4O60885 1362 aaPredicted RBP2.5□□□□□ -2.01
PRKDC-208ENST00000536710 IGHV3-73A0A0B4J1V6 119 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 DHRS12A0PJE2 317 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 MAGEA2P43356 314 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 FABP5Q01469 135 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 MGAT3Q09327 533 aa2.5□□□□□ -2.01
PRKDC-208ENST00000536710 MLLT11Q13015 90 aaPredicted RBP2.5□□□□□ -2.01
PRKDC-208ENST00000536710 PPP1R1AQ13522 171 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms