RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 AMMECR1Q9Y4X0 333 aaPredicted RBP12.64□□□□□ -0.39
CNN1-202ENST00000535659 MINOS1-NBL1R4GNA1 71 aa12.64□□□□□ -0.39
CNN1-202ENST00000535659 LY6LH3BQJ8 138 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 J3QRK9 145 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 ST8SIA5O15466 376 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 EPHA1P21709 976 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 AADACP22760 399 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 CEACAM3P40198 252 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 LUMP51884 338 aaPredicted RBP12.63□□□□□ -0.39
CNN1-202ENST00000535659 LDLRAD2Q5SZI1 272 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 ZNF57Q68EA5 555 aaPredicted RBP12.63□□□□□ -0.39
CNN1-202ENST00000535659 TMEM17Q86X19 198 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 LYG1Q8N1E2 194 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 DEDD2Q8WXF8 326 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 AJUBAQ96IF1 538 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 SLC6A7Q99884 636 aa12.63□□□□□ -0.39
CNN1-202ENST00000535659 ZNF2Q9BSG1 426 aaPredicted RBP12.63□□□□□ -0.39
CNN1-202ENST00000535659 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
CNN1-202ENST00000535659 SOX21Q9Y651 276 aaPredicted RBP12.63□□□□□ -0.39
CNN1-202ENST00000535659 SONP18583 2426 aaKnown RBP12.62□□□□□ -0.39
CNN1-202ENST00000535659 IL3RAP26951 378 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 ODF3L1Q8IXM7 274 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
CNN1-202ENST00000535659 ARRDC1Q8N5I2 433 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 OR4C16Q8NGL9 310 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 FAM216AQ8WUB2 273 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 C22orf15Q8WYQ4 148 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 ABHD14BQ96IU4 210 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 IFI27L2Q9H2X8 130 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 PIPOXQ9P0Z9 390 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 FAM96BQ9Y3D0 163 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 A0A0U1RQK1 487 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 DISC1C4P0D8 188 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 RAB29O14966 203 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 PPYP01298 95 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 AMY2AP04746 511 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 ZNF735P0CB33 412 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 FAUP35544 74 aaKnown RBP12.62□□□□□ -0.39
CNN1-202ENST00000535659 OR56B4Q8NH76 319 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 C17orf50Q8WW18 174 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 ST6GALNAC6Q969X2 333 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 ZNF221Q9UK13 617 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 GAB2Q9UQC2 676 aa12.62□□□□□ -0.39
CNN1-202ENST00000535659 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 CRLF1O75462 422 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 SRD5A1P18405 259 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 ZNF137PP52743 207 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 HERV-K104P61576 105 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 SSX2Q16385 188 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 TPTE2P1Q5T6R2 138 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 FAAP20Q6NZ36 180 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 LDLRAD3Q86YD5 345 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 TERB2Q8NHR7 220 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 ABCB10Q9NRK6 738 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 HILPDAQ9Y5L2 63 aa12.61□□□□□ -0.39
CNN1-202ENST00000535659 MXRA5Q9NR99 2828 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 LINC00854A0A1B0GVQ3 168 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 OOSP1A8MZH6 123 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 SLC22A5O76082 557 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
CNN1-202ENST00000535659 GPR12P47775 334 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 FXYD4P59646 89 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 SCGB2A2Q13296 93 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 DIAPH2-AS1Q14236 149 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 DYNAPQ8N1N2 210 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 RPEQ96AT9 228 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 MOB3AQ96BX8 217 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 S1PR3Q99500 378 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 MEGF9Q9H1U4 602 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 OR2D2Q9H210 308 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 MCUBQ9NWR8 336 aa12.6□□□□□ -0.39
CNN1-202ENST00000535659 NIPBLQ6KC79 2804 aaeCLIP12.6□□□□□ -0.39
CNN1-202ENST00000535659 CUBNO60494 3623 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 SAA2-SAA4A0A096LPE2 208 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 OR5H14A6NHG9 310 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 PROP1O75360 226 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 UPK1BO75841 260 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 FBP1P09467 338 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 SAA2P0DJI9 122 aaPredicted RBP12.59□□□□□ -0.39
CNN1-202ENST00000535659 DEFB112Q30KQ8 113 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 SCGB2B2Q4G0G5 96 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 ZNF833PQ6ZTB9 187 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 LHFPL1Q86WI0 220 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.59□□□□□ -0.39
CNN1-202ENST00000535659 OR51S1Q8NGJ8 323 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 SECTM1Q8WVN6 248 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 PRRT1Q99946 306 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 ZNF251Q9BRH9 671 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 SLC5A7Q9GZV3 580 aa12.59□□□□□ -0.39
CNN1-202ENST00000535659 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 CENPXA8MT69 81 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 HSD17B6O14756 317 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 PLA2G10O15496 165 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 PAX6P26367 422 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 UCP3P55916 312 aa12.58□□□□□ -0.4
CNN1-202ENST00000535659 ZNF816Q0VGE8 651 aaPredicted RBP12.58□□□□□ -0.4
CNN1-202ENST00000535659 RPL39P5Q59GN2 51 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms