RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 PNO1Q9NRX1 252 aaKnown RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 OR6C3Q9NZP0 311 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ZNF391Q9UJN7 358 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 NXT1Q9UKK6 140 aaKnown RBP5.61□□□□□ -1.51
USP28-202ENST00000535607 MYO15AQ9UKN7 3530 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 ZFP30Q9Y2G7 519 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TIMM9Q9Y5J7 89 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 TMEM56-RWDD3S4R434 201 aa5.61□□□□□ -1.51
USP28-202ENST00000535607 SNRNP200O75643 2136 aaKnown RBP5.6□□□□□ -1.51
USP28-202ENST00000535607 ABCA7Q8IZY2 2146 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 CPAMD8Q8IZJ3 1885 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 IGSF23A1L1A6 192 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 B4E171 279 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 MS4A18H0YCH9 400 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ITGB1BP1O14713 200 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 PROP1O75360 226 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ZNF737O75373 536 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 TNFSF13O75888 250 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 MMP23AO75900 390 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 MPZL1O95297 269 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OPN1LWP04000 364 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 GNRHRP30968 328 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 TSPAN7P41732 249 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 RPL29P47914 159 aaKnown RBP5.6□□□□□ -1.51
USP28-202ENST00000535607 BIDP55957 195 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 FXYD4P59646 89 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ATP6V1FQ16864 119 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 MS4A18Q3C1V0 323 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 SP6Q3SY56 376 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ANXA2RQ3ZCQ2 193 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 COX19Q49B96 90 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 PHLDA2Q53GA4 152 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ZNF542PQ5EBM4 170 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 PET117Q6UWS5 81 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 FAM57BQ71RH2 274 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 C16orf82Q7Z2V1 217 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 SMIM15Q7Z3B0 74 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 CENPVQ7Z7K6 275 aaPredicted RBP5.6□□□□□ -1.51
USP28-202ENST00000535607 KLHDC1Q8N7A1 406 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 SUMF1Q8NBK3 374 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 GJC3Q8NFK1 279 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OR4B1Q8NGF8 309 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OR8B12Q8NGG6 310 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OR51G1Q8NGK1 321 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OR5D18Q8NGL1 313 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 OR10J5Q8NHC4 309 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 SSC4DQ8WTU2 575 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 ZNF385AQ96PM9 386 aaKnown RBP5.6□□□□□ -1.51
USP28-202ENST00000535607 GAL3ST4Q96RP7 486 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 VAMP8Q9BV40 100 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 NXF5Q9H1B4 397 aaKnown RBP5.6□□□□□ -1.51
USP28-202ENST00000535607 OR51B6Q9H340 312 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 SLC39A9Q9NUM3 307 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 IL17BQ9UHF5 180 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 CUL9Q8IWT3 2517 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 CACNA1HO95180 2353 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 USP34Q70CQ2 3546 aa5.6□□□□□ -1.51
USP28-202ENST00000535607 DMDP11532 3685 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 HEATR5AQ86XA9 2040 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 KIR2DS1A0A191URI9 304 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 NKX2-6A6NCS4 301 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A10PA6NDY2 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A20PA6NIJ5 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A8PA6NJQ4 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A7PA6NKC0 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM166BA8MTA8 275 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A22PA8MWA6 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A12PA8MX19 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A23PA8MXZ1 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 PROB1E7EW31 1015 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 DUX1O43812 170 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 TSPAN2O60636 221 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 SYNGR4O95473 234 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 EML2O95834 649 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 HPRT1P00492 218 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 IGLV2-14P01704 120 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A13PP0C7W8 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 FAM90A24PP0C7X0 464 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 PVRP15151 417 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 OMGP23515 440 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 MDH2P40926 338 aaKnown RBP5.59□□□□□ -1.51
USP28-202ENST00000535607 KIR2DS4P43632 304 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 NPBWR2P48146 333 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 DUSP3P51452 185 aaPredicted RBP5.59□□□□□ -1.51
USP28-202ENST00000535607 KLF3P57682 345 aaPredicted RBP5.59□□□□□ -1.51
USP28-202ENST00000535607 PPP1CBP62140 327 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 MEF2BQ02080 365 aaPredicted RBP5.59□□□□□ -1.51
USP28-202ENST00000535607 ZNF92Q03936 586 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 C1orf61Q13536 156 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 KIR2DS1Q14954 304 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 SHBQ15464 509 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 EXT1Q16394 746 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 DEFB133Q30KQ1 61 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 SPIN3Q5JUX0 258 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 LEMD1Q68G75 181 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 ZNF880Q6PDB4 577 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 DHRS13Q6UX07 377 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 Q6ZS49 121 aa5.59□□□□□ -1.51
USP28-202ENST00000535607 C6orf201Q7Z4U5 140 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms