RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ARRDC1Q8N5I2 433 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 OR2T27Q8NH04 317 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 CCDC107Q8WV48 283 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 FCAMRQ8WWV6 532 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 S100A13Q99584 98 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 CHMP1AQ9HD42 196 aaPredicted RBP6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 UQCC1Q9NVA1 299 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 GNG8Q9UK08 70 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 VPREB3Q9UKI3 123 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 TNFSF18Q9UNG2 199 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 SLC7A11Q9UPY5 501 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 TMED3Q9Y3Q3 217 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 RNF114Q9Y508 228 aa6.98□□□□□ -1.29
SFSWAP-202ENST00000535202 ELOA3CA0A087WX78 387 aaPredicted RBP6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 DHRS7CA6NNS2 312 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 MFNGO00587 321 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 WIPF1O43516 503 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 CCL1P22362 96 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 MPZP25189 248 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 S100A2P29034 98 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 DDTP30046 118 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 CDX1P47902 265 aaPredicted RBP6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 NPBWR1P48145 328 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 RPL31P62899 125 aaKnown RBP6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 NHLH2Q02577 135 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 ZNF85Q03923 595 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 TP53I3Q53FA7 332 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 AWAT2Q6E213 333 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 HCP5Q6MZN7 132 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 Q6ZSR3 168 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 Q6ZSV7 163 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 ZNF546Q86UE3 836 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 MKXQ8IYA7 352 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 COMMD1Q8N668 190 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 OR5D13Q8NGL4 314 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 LINC01006Q8NI28 216 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 C2CD4CQ8TF44 421 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 RNF141Q8WVD5 230 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 R3HDM4Q96D70 268 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 NOL4LQ96MY1 436 aaPredicted RBP6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 NRIP2Q9BQI9 281 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 GPR61Q9BZJ8 451 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 PKIBQ9C010 78 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 ETV7Q9Y603 341 aa6.97□□□□□ -1.29
SFSWAP-202ENST00000535202 LOC107986453A0A1B0GWG9 222 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 A0A1W2PPH5 198 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 SMIM30A4D0T7 59 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 TXNL1O43396 289 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 TK1P04183 234 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 CCL3L1P16619 93 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 RAB5AP20339 215 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 COX7A1P24310 79 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 CAV2P51636 162 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 FUT6P51993 359 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 H2BFSP57053 126 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 KRTAP10-3P60369 221 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 COL10A1Q03692 680 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 IL24Q13007 206 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 GAGE1Q13065 139 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 ALKBH1Q13686 389 aaKnown RBP6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 UBE2V2Q15819 145 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 RNASE10Q5GAN6 216 aaKnown RBP6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 C9orf152Q5JTZ5 239 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 TMEM200BQ69YZ2 307 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 RAB12Q6IQ22 244 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 PRSS35Q8N3Z0 413 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 ACBD7Q8N6N7 88 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 CCDC54Q8NEL0 328 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 OR1S2Q8NGQ3 325 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 OR5R1Q8NH85 324 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 SLAMF9Q96A28 289 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 BORCS8Q96FH0 119 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 CITED1Q99966 193 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 CHST5Q9GZS9 411 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 HES4Q9HCC6 221 aa6.96□□□□□ -1.3
SFSWAP-202ENST00000535202 NBEAL1Q6ZS30 2694 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 IGKV1-27A0A075B6S5 117 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 TRAV14DV4A0A0A6YYC5 116 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 hCG_1809904A0A1W2PP81 198 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 A0A1W2PPE2 198 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 A0A1W2PR64 198 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 A0A1W2PRV1 198 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 MARCH11A6NNE9 402 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 SEC14L6B5MCN3 397 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 H3BUX3 64 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 TIMM23O14925 209 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 CSF1P09603 554 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 LINC00614P0C842 121 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 CALCBP10092 127 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 TPT1P13693 172 aaKnown RBP6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 KIR3DL2P43630 455 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 PPT1P50897 306 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 EDDM3BP56851 147 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 PROK1P58294 105 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 ERVK11-1P61568 191 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 NUTF2P61970 127 aaKnown RBP6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 ACTC1P68032 377 aa6.95□□□□□ -1.3
SFSWAP-202ENST00000535202 ACTA1P68133 377 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms