RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 OR8H3Q8N146 312 aa11.21□□□□□ -0.61
VPS11-205ENST00000534551 ACOT12Q8WYK0 555 aa11.21□□□□□ -0.61
VPS11-205ENST00000534551 SNAPC3Q92966 411 aa11.21□□□□□ -0.61
VPS11-205ENST00000534551 S100A16Q96FQ6 103 aaKnown RBP11.21□□□□□ -0.61
VPS11-205ENST00000534551 ZNF251Q9BRH9 671 aa11.21□□□□□ -0.61
VPS11-205ENST00000534551 ZNF702PQ9H963 129 aa11.21□□□□□ -0.61
VPS11-205ENST00000534551 CCDC59Q9P031 241 aaKnown RBP11.21□□□□□ -0.61
VPS11-205ENST00000534551 TRBV6-7A0A0A0MS04 114 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 FAM90A9PA6NNJ1 464 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 FAM25AB3EWG3 89 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 FAM25CB3EWG5 89 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 FAM25GB3EWG6 89 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 GAPDHP04406 335 aaKnown RBP11.2□□□□□ -0.62
VPS11-205ENST00000534551 BRS3P32247 399 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 ARHGDIBP52566 201 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 LSAMPQ13449 338 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 LY6G6FQ5SQ64 297 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 GLDNQ6ZMI3 551 aaPredicted RBP11.2□□□□□ -0.62
VPS11-205ENST00000534551 Q6ZS49 121 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 OR4F5Q8NH21 305 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 AP3S1Q92572 193 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 NABP2Q9BQ15 211 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 BCL7BQ9BQE9 202 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
VPS11-205ENST00000534551 MRPS7Q9Y2R9 242 aaKnown RBP11.2□□□□□ -0.62
VPS11-205ENST00000534551 POM121CA8CG34 1229 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 CTDSP2O14595 271 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 LANCL1O43813 399 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 HLA-DQB1P01920 261 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 AMY1AP04745 511 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 AMY2AP04746 511 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 TMEM11P17152 192 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 NFYAP23511 347 aaPredicted RBP11.19□□□□□ -0.62
VPS11-205ENST00000534551 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
VPS11-205ENST00000534551 KRTAP10-3P60369 221 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 RPL15P61313 204 aaKnown RBP11.19□□□□□ -0.62
VPS11-205ENST00000534551 BLCAPP62952 87 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 PITPNAQ00169 270 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 FOXL1Q12952 345 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 H1FOOQ8IZA3 346 aaPredicted RBP11.19□□□□□ -0.62
VPS11-205ENST00000534551 BEST4Q8NFU0 473 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 OR10J5Q8NHC4 309 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 LINC01006Q8NI28 216 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 GINS4Q9BRT9 223 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 SLIRPQ9GZT3 109 aaKnown RBP11.19□□□□□ -0.62
VPS11-205ENST00000534551 OR2D2Q9H210 308 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 EXTL2Q9UBQ6 330 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 ANXA10Q9UJ72 324 aa11.19□□□□□ -0.62
VPS11-205ENST00000534551 HAX1O00165 279 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 PROP1O75360 226 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 OR8U9P0C7N5 309 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 SOX6P35712 828 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 SRSF7Q16629 238 aaKnown RBP eCLIP11.18□□□□□ -0.62
VPS11-205ENST00000534551 MZT2AQ6P582 158 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 CNIH2Q6PI25 160 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 FAM131AQ6UXB0 335 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 LIAT1Q6ZQX7 453 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 DRAXINQ8NBI3 349 aaPredicted RBP11.18□□□□□ -0.62
VPS11-205ENST00000534551 OR4C13Q8NGP0 309 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 OR8U1Q8NH10 309 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 SPATA3Q8NHX4 192 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 EDARADDQ8WWZ3 215 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 EAF1Q96JC9 268 aaPredicted RBP11.18□□□□□ -0.62
VPS11-205ENST00000534551 RBM14Q96PK6 669 aaKnown RBP11.18□□□□□ -0.62
VPS11-205ENST00000534551 NPFFR1Q9GZQ6 430 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 RAB18Q9NP72 206 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 IFT46Q9NQC8 304 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 RSL24D1Q9UHA3 163 aaKnown RBP11.18□□□□□ -0.62
VPS11-205ENST00000534551 PITPNC1Q9UKF7 332 aa11.18□□□□□ -0.62
VPS11-205ENST00000534551 PLXNB1O43157 2135 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 IGKV1D-13A0A0B4J2D9 117 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 CLPSL1A2RUU4 121 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 ITGB1BP1O14713 200 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 RGS5O15539 181 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 TSPAN9O75954 239 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 OR2F2O95006 317 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 IGKV1-13P0DP09 117 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 CNTFRP26992 372 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 GPR12P47775 334 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 ABCA11PQ4W5N1 156 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 FOXB2Q5VYV0 432 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 Q8N6K4 173 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 RITA1Q96K30 269 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
VPS11-205ENST00000534551 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 PIPOXQ9P0Z9 390 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 ANAPC10Q9UM13 185 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 MOB4Q9Y3A3 225 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
VPS11-205ENST00000534551 M0R1X1 148 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 RAB29O14966 203 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 TXNL1O43396 289 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 CT45A6P0DMU7 189 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 CT45A5P0DMU8 189 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 CT45A7P0DMV0 189 aa11.16□□□□□ -0.62
VPS11-205ENST00000534551 PROK1P58294 105 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms