RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 RAB3DO95716 219 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 BCHEP06276 602 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 OR12D1P0DN82 309 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 ZNF43P17038 809 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 UBE2NP61088 152 aaKnown RBP3.58□□□□□ -1.84
CASP4-213ENST00000534356 RPL38P63173 70 aaKnown RBP3.58□□□□□ -1.84
CASP4-213ENST00000534356 HBA1P69905 142 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 HOXC5Q00444 222 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 MAB21L1Q13394 359 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 SSX2Q16385 188 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 IMPG1Q17R60 797 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 CEACAM16Q2WEN9 425 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 VPS26BQ4G0F5 336 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 Q5W150 140 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 Q6ZSR3 168 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 ZCCHC23Q6ZST2 131 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 C17orf78Q8N4C9 275 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 ZNF563Q8TA94 476 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 PIGXQ8TBF5 258 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 STACQ99469 402 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 KCNS3Q9BQ31 491 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 C1orf50Q9BV19 199 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 EMC6Q9BV81 110 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 OR51I1Q9H343 314 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 ZNF442Q9H7R0 627 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 UBAP1Q9NZ09 502 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 TAAR3PQ9P1P4 343 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 SLC17A7Q9P2U7 560 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 DNAH1Q9P2D7 4330 aa3.58□□□□□ -1.84
CASP4-213ENST00000534356 HUWE1Q7Z6Z7 4374 aaKnown RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 ARPC4-TTLL3A0A0A6YYG9 625 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 A0A0G2JMP0 313 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 A0A0X1KG70 313 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ZNF816-ZNF321PA0A0X1KG74 233 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ZNF705GA8MUZ8 300 aaPredicted RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 M0R233 179 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 M0R3G1 203 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 MRPS12O15235 138 aaKnown RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 CLIC3O95833 236 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 CD79AP11912 226 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ZNF14P17017 642 aaPredicted RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 TCP1P17987 556 aaKnown RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 CEACAM6P40199 344 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 TMEM33P57088 247 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 GNG11P61952 73 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ESRRGP62508 458 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SLC35A1P78382 337 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 PRB3Q04118 309 aaPredicted RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 SYCNQ0VAF6 134 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 LY6EQ16553 131 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 DEFB112Q30KQ8 113 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 TNFAIP8L2Q6P589 184 aaPredicted RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 RNASEKQ6P5S7 137 aaKnown RBP3.57□□□□□ -1.84
CASP4-213ENST00000534356 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 BRD3OSQ6XYD6 125 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 GRINAQ7Z429 371 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 RIMKLAQ8IXN7 391 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ZNF709Q8N972 641 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SPATA4Q8NEY3 305 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 NOXO1Q8NFA2 376 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 OR4M2Q8NGB6 313 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SYNPRQ8TBG9 265 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 L3HYPDHQ96EM0 354 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SLC25A2Q9BXI2 301 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 TANC2Q9HCD6 1990 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SIRT7Q9NRC8 400 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 ZNF355PQ9NSJ1 428 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 C1orf109Q9NX04 203 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SLC2A8Q9NY64 477 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 STARD10Q9Y365 291 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 HDGFL3Q9Y3E1 203 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 SAR1BQ9Y6B6 198 aa3.57□□□□□ -1.84
CASP4-213ENST00000534356 LRRN3E7EW58 273 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 LSM1O15116 133 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 SCAMP2O15127 329 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 BET1O15155 118 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 WBP4O75554 376 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 CPSF4O95639 269 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 IGHV1-8P0DP01 117 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 MUC1P15941 1255 aaPredicted RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 LCN1P31025 176 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 GLRXP35754 106 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 MPV17P39210 176 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 AQP2P41181 271 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 RPS5P46782 204 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 POLR2HP52434 150 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 ZNF138P52744 262 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 NAB1Q13506 487 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 ARHGAP11BQ3KRB8 267 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 C16orf87Q6PH81 154 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 CEMP1Q6PRD7 247 aaPredicted RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 EIF3MQ7L2H7 374 aaKnown RBP3.56□□□□□ -1.84
CASP4-213ENST00000534356 COMTD1Q86VU5 262 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 IQCF2Q8IXL9 164 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 TMEM234Q8WY98 164 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 OR5P2Q8WZ92 322 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 CCL17Q92583 94 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 ROPN1LQ96C74 230 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 ZHX1-C8orf76Q96EF9 292 aa3.56□□□□□ -1.84
CASP4-213ENST00000534356 ATP5SQ99766 215 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms