RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 CLDN18P56856 261 aa10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 CTAG1AP78358 180 aa10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 IBA57Q5T440 356 aaKnown RBP10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 CYB5R2Q6BCY4 276 aa10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 LRRC29Q8WV35 223 aa10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 EP300Q09472 2414 aaPredicted RBP10.53□□□□□ -0.72
AMBRA1-212ENST00000534300 TRBV9A0A0B4J1U6 114 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 CYR61O00622 381 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 NTN1O95631 604 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 PSG2P11465 335 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 GCSHP23434 173 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 PPP1CCP36873 323 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 HERPUD1Q15011 391 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 WFDC8Q8IUA0 241 aa10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 SF3B6Q9Y3B4 125 aaKnown RBP10.52□□□□□ -0.72
AMBRA1-212ENST00000534300 CD8AP01732 235 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 OR8B3Q8NGG8 313 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 SNRNP40Q96DI7 357 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 TRIP11Q15643 1979 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 RIF1Q5UIP0 2472 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 LIPT2A6NK58 231 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 RAC3P60763 192 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 KIR3DL2P43630 455 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 LINC00596Q86U02 117 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 RND1Q92730 232 aa10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 BRCA1P38398 1863 aaKnown RBP10.52□□□□□ -0.73
AMBRA1-212ENST00000534300 J3QT63 122 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 SLC35B1P78383 322 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 DCAF10Q5QP82 559 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 SLC25A45Q8N413 288 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 OR1K1Q8NGR3 316 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 RAB37Q96AX2 223 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 SF3B5Q9BWJ5 86 aaKnown RBP10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TMEM222Q9H0R3 208 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 CXXC4Q9H2H0 198 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 DSPPQ9NZW4 1301 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 NCOR1O75376 2440 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 GOSR1O95249 250 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 FCGR3AP08637 254 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 C1orf100Q5SVJ3 147 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 ARL6IP6Q8N6S5 226 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TAF15Q92804 592 aaKnown RBP eCLIP10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 DNAJC4Q9NNZ3 241 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TMEM74BQ9NUR3 256 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 SH2D7A6NKC9 451 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 K7ESF4 209 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 GREM1O60565 184 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 WISP3O95389 354 aaPredicted RBP10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 CD74P04233 296 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 RNF224P0DH78 156 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 PRRX1P54821 245 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 KHDC1LQ5JSQ8 128 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 EP400Q96L91 3159 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 A0A1W2PR77 199 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 HOXA5P20719 270 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TWIST1Q15672 202 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 ZNF124Q15973 351 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 PQLC2Q6ZP29 291 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 TMEM45BQ96B21 275 aa10.51□□□□□ -0.73
AMBRA1-212ENST00000534300 H0Y980 276 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 PATE4P0C8F1 98 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 SRD5A2P31213 254 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 NPBWR2P48146 333 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 C19orf48Q6RUI8 117 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 NIT1Q86X76 327 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 TGIF2LYQ8IUE0 185 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 GBGT1Q8N5D6 347 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 OR1N2Q8NGR9 330 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 SCNM1Q9BWG6 230 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 ZDHHC8Q9ULC8 765 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 C19orf67A6NJJ6 358 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 DNPH1O43598 174 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 KBTBD11O94819 623 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 HOXB3P14651 431 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 RPS11P62280 158 aaKnown RBP eCLIP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 OR10D3Q8NH80 312 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 SARGQ9BW04 601 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 OPN3Q9H1Y3 402 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 MEX3AA1L020 520 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 SCGB1A1P11684 91 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 GNB2P62879 340 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 MESP2Q0VG99 397 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 PIGYQ3MUY2 71 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 SDHCQ99643 169 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 RARRES2Q99969 163 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 DNASE2O00115 360 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 GALNSP34059 522 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 KIR2DL2P43627 348 aaPredicted RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 LAMTOR1Q6IAA8 161 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 OR1L8Q8NGR8 309 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 QTRT1Q9BXR0 403 aaKnown RBP10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 TUBA4BQ9H853 241 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 RNF122Q9H9V4 155 aa10.5□□□□□ -0.73
AMBRA1-212ENST00000534300 CLN8Q9UBY8 286 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms