RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 HSPB7Q9UBY9 170 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 RBM7Q9Y580 266 aaKnown RBP14.03□□□□□ -0.16
CTSB-228ENST00000533455 MUC3AQ02505 3323 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 TRAV39A0A0B4J263 110 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 CD55P08174 381 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 CELA3AP09093 270 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 MDKP21741 143 aaPredicted RBP14.03□□□□□ -0.16
CTSB-228ENST00000533455 PSMB3P49720 205 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 COL10A1Q03692 680 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 DBX2Q6ZNG2 339 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 FGFRL1Q8N441 504 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 MANBALQ9NQG1 85 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 B4GALT7Q9UBV7 327 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 TRAPPC2LQ9UL33 140 aa14.03□□□□□ -0.16
CTSB-228ENST00000533455 OR2H2O95918 312 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 MBP02144 154 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 AMBPP02760 352 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 P0C879 139 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 SPINK2P20155 84 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 CA6P23280 308 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 ERVK11-1P61568 191 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 SPINK14Q6IE38 97 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.16
CTSB-228ENST00000533455 TMEM147Q9BVK8 224 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 GAB2Q9UQC2 676 aa14.02□□□□□ -0.16
CTSB-228ENST00000533455 H7BYZ3 331 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 SIRPB1O00241 398 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 WDR1O75083 606 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 CLDN1O95832 211 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 GALR1P47211 349 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 DCAF12Q5T6F0 453 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 PEAR1Q5VY43 1037 aaPredicted RBP14.02□□□□□ -0.17
CTSB-228ENST00000533455 FAM180AQ6UWF9 173 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 PRR18Q8N4B5 295 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 ZBTB34Q8NCN2 500 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 HLA-CQ95604 372 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 OR5B12Q96R08 314 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 RTL8AQ9BWD3 113 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 ACTR3CQ9C0K3 210 aaPredicted RBP14.02□□□□□ -0.17
CTSB-228ENST00000533455 PARLQ9H300 379 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 SMOC1Q9H4F8 434 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 LAMP3Q9UQV4 416 aa14.02□□□□□ -0.17
CTSB-228ENST00000533455 WDR87Q6ZQQ6 2873 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 MED12LQ86YW9 2145 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 A0A087X0M5 115 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 A0A1B0GX30 115 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 NEURL1O76050 574 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 HRASP01112 189 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 GZMHP20718 246 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 FGF7P21781 194 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 PDLIM4P50479 330 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 OR8G2PQ6IF36 304 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 C6orf15Q6UXA7 325 aaPredicted RBP14.01□□□□□ -0.17
CTSB-228ENST00000533455 ANAPC16Q96DE5 110 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 ACY3Q96HD9 319 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 IER2Q9BTL4 223 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 PRO1933Q9H354 126 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 GP6Q9HCN6 339 aa14.01□□□□□ -0.17
CTSB-228ENST00000533455 PMS2P5A8MQ11 134 aa14□□□□□ -0.17
CTSB-228ENST00000533455 CEACAM6P40199 344 aa14□□□□□ -0.17
CTSB-228ENST00000533455 FAM3BP58499 235 aaPredicted RBP14□□□□□ -0.17
CTSB-228ENST00000533455 MSMO1Q15800 293 aa14□□□□□ -0.17
CTSB-228ENST00000533455 SSX9Q7RTT3 188 aa14□□□□□ -0.17
CTSB-228ENST00000533455 WDR86Q86TI4 376 aa14□□□□□ -0.17
CTSB-228ENST00000533455 TMEM170AQ8WVE7 144 aa14□□□□□ -0.17
CTSB-228ENST00000533455 RAB24Q969Q5 203 aa14□□□□□ -0.17
CTSB-228ENST00000533455 RPUSD4Q96CM3 377 aaKnown RBP14□□□□□ -0.17
CTSB-228ENST00000533455 MRPL37Q9BZE1 423 aaKnown RBP14□□□□□ -0.17
CTSB-228ENST00000533455 SLC25A22Q9H936 323 aa14□□□□□ -0.17
CTSB-228ENST00000533455 POLDIP2Q9Y2S7 368 aa14□□□□□ -0.17
CTSB-228ENST00000533455 PPP5D1E7EU14 171 aa14□□□□□ -0.17
CTSB-228ENST00000533455 GZMBP10144 247 aa14□□□□□ -0.17
CTSB-228ENST00000533455 EIF4EBP1Q13541 118 aaPredicted RBP14□□□□□ -0.17
CTSB-228ENST00000533455 UNQ6494/PRO21346Q6UXR6 183 aa14□□□□□ -0.17
CTSB-228ENST00000533455 TIPARPQ7Z3E1 657 aaKnown RBP14□□□□□ -0.17
CTSB-228ENST00000533455 NUFIP2Q7Z417 695 aaKnown RBP14□□□□□ -0.17
CTSB-228ENST00000533455 ZNF645Q8N7E2 425 aa14□□□□□ -0.17
CTSB-228ENST00000533455 THOC3Q96J01 351 aaKnown RBP14□□□□□ -0.17
CTSB-228ENST00000533455 GGCTO75223 188 aaKnown RBP13.99□□□□□ -0.17
CTSB-228ENST00000533455 MT-CO3P00414 261 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 TYMSP04818 313 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 ZNF146Q15072 292 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 SCCPDHQ8NBX0 429 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 OR10G9Q8NGN4 311 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 OR10G7Q8NGN6 311 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 UBALD1Q8TB05 177 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 MEGF10Q96KG7 1140 aa13.99□□□□□ -0.17
CTSB-228ENST00000533455 J3QW42 95 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 VENTXO95231 258 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 CER1O95813 267 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 ERVS71-1P61550 626 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 IGFBP7Q16270 282 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 VWC2Q2TAL6 325 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 ACTL10Q5JWF8 245 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 NECAP1Q8NC96 275 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 OR51B6Q9H340 312 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 A0A1B0GV90 55 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 XKRY2A2RUG3 117 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 LRRC30A6NM36 301 aa13.98□□□□□ -0.17
CTSB-228ENST00000533455 PATE3B3GLJ2 98 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms