RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 HRH4Q9H3N8 390 aa6.82□□□□□ -1.32
NEDD8-207ENST00000533242 WFDC1Q9HC57 220 aa6.82□□□□□ -1.32
NEDD8-207ENST00000533242 C12orf4Q9NQ89 552 aa6.82□□□□□ -1.32
NEDD8-207ENST00000533242 DNAJB11Q9UBS4 358 aa6.82□□□□□ -1.32
NEDD8-207ENST00000533242 SLC7A11Q9UPY5 501 aa6.82□□□□□ -1.32
NEDD8-207ENST00000533242 CLDN34H7C241 214 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 FOXH1O75593 365 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 SCTP09683 121 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 GCH1P30793 250 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 WNT5AP41221 380 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 HFEQ30201 348 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 MOB3AQ96BX8 217 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 GALNT14Q96FL9 552 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 NKX6-2Q9C056 277 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-207ENST00000533242 TAF9BQ9HBM6 251 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 CDH20Q9HBT6 801 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF391Q9UJN7 358 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 MMP24Q9Y5R2 645 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 RFNGQ9Y644 331 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 SVEP1Q4LDE5 3571 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 ARHGAP32A7KAX9 2087 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 IGKV1D-13A0A0B4J2D9 117 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 IGKV1-6A0A0C4DH72 117 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 RAB19A4D1S5 217 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 K7EPK0 472 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 AGPAT2O15120 278 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 TPD52L2O43399 206 aaKnown RBP6.81□□□□□ -1.32
NEDD8-207ENST00000533242 PPYP01298 95 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 IGKV1-13P0DP09 117 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 MUC1P15941 1255 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-207ENST00000533242 FUT3P21217 361 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 ZFP36P26651 326 aaKnown RBP6.81□□□□□ -1.32
NEDD8-207ENST00000533242 GNRHRP30968 328 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 LCN2P80188 198 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 MALLQ13021 153 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 DPPA2Q7Z7J5 298 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 CBLN2Q8IUK8 224 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 FAM71E2Q8N5Q1 922 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 Q8NFD4 153 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 OR5T2Q8NGG2 359 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
NEDD8-207ENST00000533242 SMIM8Q96KF7 97 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 POM121L2Q96KW2 1035 aa6.81□□□□□ -1.32
NEDD8-207ENST00000533242 WNK2Q9Y3S1 2297 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF732B4DXR9 585 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 FHITP49789 147 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 NRN1LQ496H8 165 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 ABCA11PQ4W5N1 156 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 LIAT1Q6ZQX7 453 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 SLC35G3Q8N808 338 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 DEFB108BQ8NET1 73 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 DMBX1Q8NFW5 382 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 DUX5Q96PT3 197 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 BCL2L14Q9BZR8 327 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 SAP30LQ9HAJ7 183 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF286AQ9HBT8 521 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 GLS2Q9UI32 602 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 POLR3KQ9Y2Y1 108 aaPredicted RBP6.8□□□□□ -1.32
NEDD8-207ENST00000533242 PKD1L1Q8TDX9 2849 aa6.8□□□□□ -1.32
NEDD8-207ENST00000533242 A0A1B0GW55 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 TOR1AO14656 332 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 MED6O75586 246 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 NAPSAO96009 420 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 IGHV3-13P01766 116 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 OR8U9P0C7N5 309 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L2P0CJ85 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L3P0CJ86 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L4P0CJ87 422 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L5P0CJ88 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L6P0CJ89 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4L7P0CJ90 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 PET100P0DJ07 73 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ECI1P42126 302 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 NPBWR1P48145 328 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 HOXA4Q00056 320 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 NHLH2Q02577 135 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 TBC1D28Q2M2D7 210 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 SPATA46Q5T0L3 261 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 UQCC3Q6UW78 93 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 MRPL21Q7Z2W9 205 aaKnown RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 BCL6BQ8N143 479 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 OR8U1Q8NH10 309 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 GTF3AQ92664 365 aaKnown RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ARL11Q969Q4 196 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ZNF48Q96MX3 618 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 RSRP1Q9BUV0 290 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 SH3BGRL3Q9H299 93 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 ZC4H2Q9NQZ6 224 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 MMP26Q9NRE1 261 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 DUX4Q9UBX2 424 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 PURGQ9UJV8 347 aaKnown RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 TGP01266 2768 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 IGHV3-64DA0A0J9YX35 117 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 SLC33A1O00400 549 aaPredicted RBP6.79□□□□□ -1.32
NEDD8-207ENST00000533242 RHBDL1O75783 438 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 IFNA21P01568 189 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 KCNJ3P48549 501 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 UCP2P55851 309 aa6.79□□□□□ -1.32
NEDD8-207ENST00000533242 FGF12P61328 243 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms