RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KCNK7Q9Y2U2 307 aa23.88■■□□□ 1.41
SSSCA1-207ENST00000533115 HSPA12AO43301 675 aa23.87■■□□□ 1.41
SSSCA1-207ENST00000533115 CEACAM6P40199 344 aa23.87■■□□□ 1.41
SSSCA1-207ENST00000533115 COMMD1Q8N668 190 aa23.87■■□□□ 1.41
SSSCA1-207ENST00000533115 OR10R2Q8NGX6 335 aa23.87■■□□□ 1.41
SSSCA1-207ENST00000533115 PRKDCP78527 4128 aaKnown RBP23.87■■□□□ 1.41
SSSCA1-207ENST00000533115 A0A0B4J203 849 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 PF4P02776 101 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 SOX6P35712 828 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 MRPS15P82914 257 aaKnown RBP23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 MMDQ15546 238 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 WFDC9Q8NEX5 89 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 EDARADDQ8WWZ3 215 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 HSPB9Q9BQS6 159 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 ZNF251Q9BRH9 671 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 AGMATQ9BSE5 352 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 GHITMQ9H3K2 345 aa23.86■■□□□ 1.41
SSSCA1-207ENST00000533115 TRDCB7Z8K6 153 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 CD3GP09693 182 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 CD33P20138 364 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 GADD45AP24522 165 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 ACTBP60709 375 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 RPL23AP62750 156 aaKnown RBP23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 RPL39P5Q59GN2 51 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 OXLD1Q5BKU9 147 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 PTX4Q96A99 478 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 RITA1Q96K30 269 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 GON7Q9BXV9 100 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 C11orf54Q9H0W9 315 aaPredicted RBP23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 SSR3Q9UNL2 185 aa23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 RRP15Q9Y3B9 282 aaKnown RBP23.85■■□□□ 1.41
SSSCA1-207ENST00000533115 SMIM30A4D0T7 59 aa23.84■■□□□ 1.41
SSSCA1-207ENST00000533115 RAB27BO00194 218 aa23.84■■□□□ 1.41
SSSCA1-207ENST00000533115 ABHD14BQ96IU4 210 aa23.84■■□□□ 1.41
SSSCA1-207ENST00000533115 ZFP57Q9NU63 452 aa23.84■■□□□ 1.41
SSSCA1-207ENST00000533115 IGKV1-6A0A0C4DH72 117 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 METTL21EPA6NDL7 271 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 RRP9O43818 475 aaKnown RBP23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 SLC2A2P11168 524 aaPredicted RBP23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 GNB3P16520 340 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 PNLIPRP3Q17RR3 467 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 TEX38Q6PEX7 206 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 TPRA1Q86W33 373 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 PHF21AQ96BD5 680 aa23.83■■□□□ 1.41
SSSCA1-207ENST00000533115 NOTOA8MTQ0 251 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 MFNGO00587 321 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 CT45A6P0DMU7 189 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 CT45A5P0DMU8 189 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 CT45A7P0DMV0 189 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 HIST1H1DP16402 221 aaKnown RBP23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 CNTFRP26992 372 aa23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 ZNF107Q9UII5 783 aaPredicted RBP23.82■■□□□ 1.4
SSSCA1-207ENST00000533115 TGP01266 2768 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 A0A075B6Q4 140 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 NBR2O15453 112 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 FCGR3AP08637 254 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 FAM131AQ6UXB0 335 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 OR4A4PQ8NGN8 299 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 OR51E2Q9H255 320 aa23.81■■□□□ 1.4
SSSCA1-207ENST00000533115 KCTD21Q4G0X4 260 aa23.8■■□□□ 1.4
SSSCA1-207ENST00000533115 NPBQ8NG41 125 aa23.8■■□□□ 1.4
SSSCA1-207ENST00000533115 ATG5Q9H1Y0 275 aa23.8■■□□□ 1.4
SSSCA1-207ENST00000533115 RNF150Q9ULK6 438 aa23.8■■□□□ 1.4
SSSCA1-207ENST00000533115 OR5H14A6NHG9 310 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 FABP7O15540 132 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 IGF1P05019 195 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 KIR2DS1Q14954 304 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 GLDNQ6ZMI3 551 aaPredicted RBP23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 C18orf65Q6ZTR6 163 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 RDH8Q9NYR8 311 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 ZNF580Q9UK33 172 aa23.79■■□□□ 1.4
SSSCA1-207ENST00000533115 IGLL1P15814 213 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 VDAC1P21796 283 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 SLC6A1P30531 599 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 MC5RP33032 325 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 SERPINB10P48595 397 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 NEDD8Q15843 81 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 C5orf64Q2M2E5 130 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 KCTD7Q96MP8 289 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 TOLLIPQ9H0E2 274 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 KIAA1456Q9P272 454 aa23.78■■□□□ 1.4
SSSCA1-207ENST00000533115 NUDT19A8MXV4 375 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 H0YJW9 148 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 NDUFA3O95167 84 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 HLA-DRB1P01911 266 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 GSTT2P0CG29 244 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 GSTT2BP0CG30 244 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 CFHR3Q02985 330 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 FOXE3Q13461 319 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 ETV3LQ6ZN32 361 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 KLHL30-AS1Q8NEE0 82 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 OR5AN1Q8NGI8 311 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 CHCHD6Q9BRQ6 235 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 CABLES2Q9BTV7 478 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 ZNF230Q9UIE0 474 aaPredicted RBP23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 DAPK2Q9UIK4 370 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 ZNF221Q9UK13 617 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 DNAH3Q8TD57 4116 aa23.77■■□□□ 1.4
SSSCA1-207ENST00000533115 BET1O15155 118 aa23.76■■□□□ 1.39
SSSCA1-207ENST00000533115 PROP1O75360 226 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms