RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 SSX5O60225 188 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 DIRAS3O95661 229 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 LPLP06858 475 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 HES1Q14469 280 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 C11orf88Q6PI97 169 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 IZUMO1Q8IYV9 350 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 Q8N6K4 173 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 PHF21AQ96BD5 680 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 KCTD12Q96CX2 325 aaKnown RBP15.83■□□□□ 0.12
CPSF1-209ENST00000532725 EAF1Q96JC9 268 aaPredicted RBP15.83■□□□□ 0.12
CPSF1-209ENST00000532725 CITED1Q99966 193 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 CABLES2Q9BTV7 478 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 ST6GALNAC5Q9BVH7 336 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 GHITMQ9H3K2 345 aa15.83■□□□□ 0.12
CPSF1-209ENST00000532725 SAA2-SAA4A0A096LPE2 208 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 TRBV6-7A0A0A0MS04 114 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 RAB29O14966 203 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 SAA2P0DJI9 122 aaPredicted RBP15.82■□□□□ 0.12
CPSF1-209ENST00000532725 TMEM11P17152 192 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 OR2T10Q8NGZ9 312 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 NUDCD2Q8WVJ2 157 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 EDARADDQ8WWZ3 215 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 RBMXL1Q96E39 390 aaKnown RBP15.82■□□□□ 0.12
CPSF1-209ENST00000532725 S100A16Q96FQ6 103 aaKnown RBP15.82■□□□□ 0.12
CPSF1-209ENST00000532725 ABHD14BQ96IU4 210 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 RDH8Q9NYR8 311 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 PIPOXQ9P0Z9 390 aa15.82■□□□□ 0.12
CPSF1-209ENST00000532725 M0QZK8 103 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 XRCC3O43542 346 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 PROP1O75360 226 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 RORCP51449 518 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 GNG2P59768 71 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 ABCA11PQ4W5N1 156 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 UBE2NLQ5JXB2 153 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 SAMD12Q8N8I0 201 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 OR10J5Q8NHC4 309 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 NABP2Q9BQ15 211 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 AUNIPQ9H7T9 357 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 PLSCR3Q9NRY6 295 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 RNF150Q9ULK6 438 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 MOB4Q9Y3A3 225 aa15.81■□□□□ 0.12
CPSF1-209ENST00000532725 BET1O15155 118 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 MOSP00540 346 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 RPL5P46777 297 aaKnown RBP15.8■□□□□ 0.12
CPSF1-209ENST00000532725 LSAMPQ13449 338 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 RPL39P5Q59GN2 51 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 FAM71F2Q6NXP2 309 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 S1PR3Q99500 378 aa15.8■□□□□ 0.12
CPSF1-209ENST00000532725 MRPL20Q9BYC9 149 aaKnown RBP15.8■□□□□ 0.12
CPSF1-209ENST00000532725 SH2D7A6NKC9 451 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-209ENST00000532725 FGF16O43320 207 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 CT45A6P0DMU7 189 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 CT45A5P0DMU8 189 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 CT45A7P0DMV0 189 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 C5orf56Q8N8D9 126 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 SGMS2Q8NHU3 365 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 WIPF2Q8TF74 440 aaPredicted RBP15.79■□□□□ 0.12
CPSF1-209ENST00000532725 ACOT12Q8WYK0 555 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 CMTM3Q96MX0 182 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 WNT10AQ9GZT5 417 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 COMMD3Q9UBI1 195 aa15.79■□□□□ 0.12
CPSF1-209ENST00000532725 PTHLHP12272 177 aa15.78■□□□□ 0.12
CPSF1-209ENST00000532725 CLVS1Q8IUQ0 354 aaPredicted RBP15.78■□□□□ 0.12
CPSF1-209ENST00000532725 KLHDC1Q8N7A1 406 aa15.78■□□□□ 0.12
CPSF1-209ENST00000532725 GAB2Q9UQC2 676 aa15.78■□□□□ 0.12
CPSF1-209ENST00000532725 EIF4EP06730 217 aaKnown RBP15.77■□□□□ 0.12
CPSF1-209ENST00000532725 CTXN2P0C2S0 81 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 VSIG10L2P0DP72 767 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 ZNF182P17025 639 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-209ENST00000532725 F2RL1P55085 397 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 TMEM95Q3KNT9 176 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 CNIH2Q6PI25 160 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 H1FOOQ8IZA3 346 aaPredicted RBP15.77■□□□□ 0.12
CPSF1-209ENST00000532725 Q8N9W7 124 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 RITA1Q96K30 269 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 ANXA10Q9UJ72 324 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 ZNF221Q9UK13 617 aa15.77■□□□□ 0.12
CPSF1-209ENST00000532725 TRRAPQ9Y4A5 3859 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 NCBP2LA6PVI3 153 aaKnown RBP15.76■□□□□ 0.11
CPSF1-209ENST00000532725 APOA1P02647 267 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 OR8U9P0C7N5 309 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 VDAC2P45880 294 aaPredicted RBP15.76■□□□□ 0.11
CPSF1-209ENST00000532725 TMBIM6P55061 237 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 SPCS2Q15005 226 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 HOGA1Q86XE5 327 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 GVQW1Q8N7I0 195 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 OR8H1Q8NGG4 311 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 OR8U1Q8NH10 309 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 GINS4Q9BRT9 223 aa15.76■□□□□ 0.11
CPSF1-209ENST00000532725 HLA-DQB1P01920 261 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 GPR12P47775 334 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 TAS2R20P59543 309 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 ARSJQ5FYB0 599 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-209ENST00000532725 C9orf152Q5JTZ5 239 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 TMEM69Q5SWH9 247 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.75■□□□□ 0.11
CPSF1-209ENST00000532725 OR5AN1Q8NGI8 311 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 RAB2BQ8WUD1 216 aa15.75■□□□□ 0.11
CPSF1-209ENST00000532725 H0YJW9 148 aa15.74■□□□□ 0.11
CPSF1-209ENST00000532725 HPGDSO60760 199 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms