RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SLC25A34Q6PIV7 304 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM234Q8WY98 164 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 FGF11Q92914 225 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RAB40CQ96S21 281 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 DERL1Q9BUN8 251 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 WNT10AQ9GZT5 417 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 AURKAIP1Q9NWT8 199 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 CHD3Q12873 2000 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 DCHS1Q96JQ0 3298 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 MPDZO75970 2070 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 LOC101059948A0A1B0GTJ6 334 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 PRSS37A4D1T9 235 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 VSTM2BA6NLU5 285 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 RPL36A-HNRNPH2H7BZ11 118 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 OR7C1O76099 320 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 UBE2NP61088 152 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 IL11RAQ14626 422 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 FBXL14Q8N1E6 418 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 GMPPAQ96IJ6 420 aaPredicted RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 MRPL18Q9H0U6 180 aaKnown RBP5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 PPIAL4AQ9Y536 164 aa5.89□□□□□ -1.47
TGFBR3-209ENST00000532540 UBE2L5PA0A1B0GUS4 154 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 C11orf94C9JXX5 98 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 F5H5K5 113 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 FAM87AP0C7U9 286 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 CD33P20138 364 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 HOXC12P31275 282 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 APOBEC1P41238 236 aaKnown RBP5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 C1orf100Q5SVJ3 147 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 C1QL3Q5VWW1 255 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 AMMECR1LQ6DCA0 310 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 C19orf35Q6ZS72 473 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 BPIFA4PQ86YQ2 179 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 PNKDQ8N490 385 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 NOXO1Q8NFA2 376 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 OR11L1Q8NGX0 322 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 CLEC5AQ9NY25 188 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 TRAV36DV7A0A075B6V5 113 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 C9orf172C9J069 976 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ISLRO14498 428 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 CHST1O43916 411 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 SERF1AO75920 110 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 EPPINO95925 133 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 IGHV3-9P01782 118 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC35E2P0CK97 266 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 FSTP19883 344 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 EMDP50402 254 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 EXT1Q16394 746 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 RPEL1Q2QD12 228 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM256Q8N2U0 113 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ZPLD1Q8TCW7 415 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 PIGTQ969N2 578 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ALKBH3Q96Q83 286 aaPredicted RBP5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ABHD14AQ9BUJ0 271 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 PBOV1Q9GZY1 135 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 SLC45A2Q9UMX9 530 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 TBL2Q9Y4P3 447 aaKnown RBP5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 GAGE12BA1L429 117 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 NKX2-6A6NCS4 301 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM250H0YL14 139 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 K7EQM0 130 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 PAGE4O60829 102 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ZNF17P17021 662 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 SERF2P84101 59 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 FMODQ06828 376 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 RTP5Q14D33 572 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 OR4D5Q8NGN0 318 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 OR4C3Q8NH37 302 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 OR51H1Q8NH63 302 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 OR2V1Q8NHB1 315 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 ADAMTS9Q9P2N4 1935 aa5.88□□□□□ -1.47
TGFBR3-209ENST00000532540 LRRK2Q5S007 2527 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PKD1L2Q7Z442 2459 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 C3orf85A0A1B0GTC6 90 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 TMEM238LA0A1B0GVL6 79 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 MT-ND6P03923 174 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 LIFP15018 202 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CYB561P49447 251 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 AESQ08117 197 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 C16orf54Q6UWD8 224 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 DOK3Q7L591 496 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 WDFY1Q8IWB7 410 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 STPG4Q8N801 248 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 OR10G3Q8NGC4 313 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 AICDAQ9GZX7 198 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 KCNIP2Q9NS61 270 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 ANXA10Q9UJ72 324 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CES1P1Q9UKY3 287 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 ESPL1Q14674 2120 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 DMXL1Q9Y485 3027 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 SNRNP200O75643 2136 aaKnown RBP5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 BMPR1BO00238 502 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 SIRPB1O00241 398 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PPBPP02775 128 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 LYL1P12980 280 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CCNOP22674 350 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 SSR4P51571 173 aa5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 POU3F1Q03052 451 aaPredicted RBP5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 CNN3Q15417 329 aaKnown RBP5.87□□□□□ -1.47
TGFBR3-209ENST00000532540 PRTGQ2VWP7 1150 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms