RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PPDPFQ9H3Y8 114 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 CWH43Q9H720 699 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SH2D2AQ9NP31 389 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 NRN1Q9NPD7 142 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 UQCC1Q9NVA1 299 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ST3GAL6Q9Y274 331 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 HDGFL3Q9Y3E1 203 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 UGT2A1Q9Y4X1 527 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 ADGRL2O95490 1459 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SPATA31E1Q6ZUB1 1445 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SSH2Q76I76 1423 aa2.49□□□□□ -2.01
PTPRK-220ENST00000531466 SETD1AO15047 1707 aaKnown RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 MBD5Q9P267 1494 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 A0A087WUU8 490 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 A0A087WX48 190 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 A0A0G2JLM5 398 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 FAM240AA0A1B0GVK7 77 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM150BA6NC51 233 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 A6NDN8 102 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 MEIS3P1A6NDR6 274 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SIGLEC16A6NMB1 481 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 CLDN25C9JDP6 229 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 H7C1C5 153 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GFYI3L273 518 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 NDUFC2O95298 119 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 NUDT14O95848 222 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HPRT1P00492 218 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 MOSP00540 346 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 NRASP01111 189 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TTRP02766 147 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 LGALS2P05162 132 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HLA-DQB2P05538 268 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HOXB7P09629 217 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GKN3PP0CG01 181 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 ESDP10768 282 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HLA-EP13747 358 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF250P15622 560 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 KDELR1P24390 212 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 ATP6V0CP27449 155 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SRIP30626 198 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SAA4P35542 130 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GLRXP35754 106 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GABRA2P47869 451 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GZMMP51124 257 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 LCN6P62502 163 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TNFAIP6P98066 277 aaPredicted RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 LAGE3Q14657 143 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 EIF5AL1Q6IS14 154 aaKnown RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SFXN4Q6P4A7 337 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 GOLT1AQ6ZVE7 132 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 PRSS41Q7RTY9 318 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 LRP11Q86VZ4 500 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TCTE3Q8IZS6 198 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM86BQ8N661 226 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 OR52L1Q8NGH7 329 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 JOSD2Q8TAC2 188 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 THEM6Q8WUY1 208 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 FAM151AQ8WW52 585 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 APOBEC3DQ96AK3 386 aaPredicted RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 PPCDCQ96CD2 204 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 MALSU1Q96EH3 234 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 VSIG2Q96IQ7 327 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 PGLYRP3Q96LB9 341 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SORT1Q99523 831 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 KCTD14Q9BQ13 255 aaPredicted RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 FAM173AQ9BQD7 235 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 ZNF670Q9BS34 389 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 SPANXDQ9BXN6 97 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 ULBP3Q9BZM4 244 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 MED28Q9H204 178 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 OR2D2Q9H210 308 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 CDC42EP4Q9H3Q1 356 aaKnown RBP2.48□□□□□ -2.01
PTPRK-220ENST00000531466 RBKSQ9H477 322 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HES4Q9HCC6 221 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 PRTFDC1Q9NRG1 225 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 UBQLN4Q9NRR5 601 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 TMEM216Q9P0N5 145 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 NAT8BQ9UHF3 227 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 PRNDQ9UKY0 176 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 HS3ST2Q9Y278 367 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 LAMTOR2Q9Y2Q5 125 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 KLF12Q9Y4X4 402 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 CDC42BPBQ9Y5S2 1711 aa2.48□□□□□ -2.01
PTPRK-220ENST00000531466 KIF21AQ7Z4S6 1674 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 KIF1BO60333 1816 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 VIRMAQ69YN4 1812 aaKnown RBP2.47□□□□□ -2.01
PTPRK-220ENST00000531466 CCDC88BA6NC98 1476 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TEX50A0A1B0GTY4 177 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 SMKR1H3BMG3 65 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 NME4O00746 187 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TRAF3IP2O43734 574 aaPredicted RBP2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TYROBPO43914 113 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 EFNA2O43921 213 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 RAMP1O60894 148 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 TBL1XO60907 577 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 KCNK2O95069 426 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 YIF1AO95070 293 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 IGHV2-5P01817 119 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 APODP05090 189 aa2.47□□□□□ -2.01
PTPRK-220ENST00000531466 CD2P06729 351 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms