RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 PIPOXQ9P0Z9 390 aa13.7□□□□□ -0.22
SF3B2-211ENST00000531041 ST8SIA5O15466 376 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 FCGR2CP31995 323 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 SSX2Q16385 188 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 RNASE10Q5GAN6 216 aaKnown RBP13.69□□□□□ -0.22
SF3B2-211ENST00000531041 TPTE2P1Q5T6R2 138 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 STEAP1BQ6NZ63 245 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 LYG1Q8N1E2 194 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 DYNAPQ8N1N2 210 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 SLC6A7Q99884 636 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 HILPDAQ9Y5L2 63 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 ZFHX3Q15911 3703 aa13.69□□□□□ -0.22
SF3B2-211ENST00000531041 M0QYG6 137 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 RAB29O14966 203 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 OR8U9P0C7N5 309 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF816Q0VGE8 651 aaPredicted RBP13.68□□□□□ -0.22
SF3B2-211ENST00000531041 LDLRAD3Q86YD5 345 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 LURAP1LQ8IV03 231 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 OR6F1Q8NGZ6 308 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 OR8U1Q8NH10 309 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 RPEQ96AT9 228 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 ABHD14BQ96IU4 210 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 GAB2Q9UQC2 676 aa13.68□□□□□ -0.22
SF3B2-211ENST00000531041 SAA2-SAA4A0A096LPE2 208 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 MDFIC2A0A1B0GVS7 189 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 RAB3DO95716 219 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 PPYP01298 95 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 AKAIN1P0CW23 69 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 SAA2P0DJI9 122 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-211ENST00000531041 AADACP22760 399 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 LUMP51884 338 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-211ENST00000531041 DIAPH2-AS1Q14236 149 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 BAK1Q16611 211 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 CCDC144NLQ6NUI1 221 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 FAM71F2Q6NXP2 309 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 Q6YL49 198 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 ARRDC1Q8N5I2 433 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-211ENST00000531041 TOMM40LQ969M1 308 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 TINAGL1Q9GZM7 467 aaPredicted RBP13.67□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF221Q9UK13 617 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 RNF150Q9ULK6 438 aa13.67□□□□□ -0.22
SF3B2-211ENST00000531041 RBM7Q9Y580 266 aaKnown RBP13.67□□□□□ -0.22
SF3B2-211ENST00000531041 VGLL3A8MV65 326 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 HSD17B6O14756 317 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 TXNL1O43396 289 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 GAPDHP04406 335 aaKnown RBP13.66□□□□□ -0.22
SF3B2-211ENST00000531041 IFNA6P05013 189 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 PAX6P26367 422 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 CD40LGP29965 261 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 GPR12P47775 334 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 PPP5CP53041 499 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 AP3S2P59780 193 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 TSPAN5P62079 268 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF846Q147U1 533 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 MEF2DQ14814 521 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 AANATQ16613 207 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF833PQ6ZTB9 187 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 TMEM17Q86X19 198 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 OR8H3Q8N146 312 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 TOMM5Q8N4H5 51 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 SIGLECL1Q8N7X8 197 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 OR4D10Q8NGI6 311 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 RTN4IP1Q8WWV3 396 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-211ENST00000531041 DEDD2Q8WXF8 326 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 ZDHHC16Q969W1 377 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 S1PR3Q99500 378 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF251Q9BRH9 671 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF2Q9BSG1 426 aaPredicted RBP13.66□□□□□ -0.22
SF3B2-211ENST00000531041 WDR12Q9GZL7 423 aaKnown RBP13.66□□□□□ -0.22
SF3B2-211ENST00000531041 OR2D2Q9H210 308 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
SF3B2-211ENST00000531041 IGKV1D-13A0A0B4J2D9 117 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 SLC22A5O76082 557 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 IGKV1-13P0DP09 117 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 DYNLT3P51808 116 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 ARHGDIBP52566 201 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-211ENST00000531041 RBMS3Q6XE24 437 aaKnown RBP13.65□□□□□ -0.22
SF3B2-211ENST00000531041 OR4C16Q8NGL9 310 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 ZNF418Q8TF45 676 aaPredicted RBP13.65□□□□□ -0.22
SF3B2-211ENST00000531041 MOB3AQ96BX8 217 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 CCDC32Q9BV29 185 aa13.65□□□□□ -0.22
SF3B2-211ENST00000531041 IGHV1-3A0A0C4DH29 117 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 A0A1W2PPI3 338 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 J3QRK9 145 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 PROP1O75360 226 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 ZNF735P0CB33 412 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 IL7P13232 177 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 HERV-K104P61576 105 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 LSAMPQ13449 338 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 LRRC75BQ2VPJ9 315 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 TGIF2LXQ8IUE1 241 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 ZNF645Q8N7E2 425 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 SSX3Q99909 188 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 AMY2AP04746 511 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 IER3P46695 156 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 REG1BP48304 166 aa13.64□□□□□ -0.23
SF3B2-211ENST00000531041 HABP2Q14520 560 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 202.6 ms